Table 1.

Performance of recurrent mutation prediction: Raw recurrence model

Recurrence window	Raw recurrence threshold	Size of true set	Average AUC	Randomized AUC
20 bp	≥2	4473	0.57	0.50
	≥3	866	0.64	0.50
	≥4	216	0.73	0.51
	≥5	94	0.74	0.47
10 bp	≥2	2795	0.58	0.50
	≥3	466	0.67	0.50
	≥4	114	0.75	0.50
	≥5	43	0.77	0.52
5 bp	≥2	1893	0.61	0.52
	≥3	292	0.68	0.47
	≥4	61	0.78	0.58
	≥5	21	0.65	0.51