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. 2016 Oct 24;44(21):10515–10525. doi: 10.1093/nar/gkw981

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — The top seven matches for the right motif (lsrA direction) based on in silico analysis performed in combination with in vitro results obtained using the deoP2 E. coli promoter reported by Pederson and Valentin-Hansen (1997) (38). The highest scoring sequence was TGTGCAAT (score = 0.741) which is the motif where the mutual mutation was found in EP01 and EP14 (TGTACAAT). This same sequence also scored high as a match for the left motif (score = 0.765—sixth highest score for the left motif), see Supplementary Table S4.