Table 3. Carrier frequency of rare and low-frequency variants in UK cases and controls.
ID | dbSNP | Major/minor allele | Casesb | Controlsb | P-value |
---|---|---|---|---|---|
CCND1–3a | rs36225071 | G/C | 0/150 | 1/222 | 0.60 |
CCND1–7 | rs36225069 | A/T | 5/151 | 7/779 | 0.03 |
CCND1–10 | rs36225073 | G/A | 8/146 | 35/743 | 0.67 |
CCND1–13 | rs3212859 | G/T | 7/142 | 34/749 | 0.83 |
CCND1–15 | rs954619 | C/T | 0/151 | 1/747 | 1.00 |
CCND1–17 | NA | T/C | 1/150 | 11/736 | 0.70 |
CCND1–18 | NA | T/C | 4/149 | 12/730 | 0.33 |
CCND1–19 | rs55911137 | G/C | 1/107 | 0/732 | 0.13 |
CCND1–20 | rs3862792 | C/T | 7/142 | 35/743 | 0.83 |
CCND1–22 | NA | G/C | 1/151 | 0/750 | 0.17 |
CCND1–27 | rs3212906 | T/A | 2/146 | 9/720 | 1.00 |
CCND1–28 | rs55666306 | G/A | 1/145 | 0/749 | 0.16 |
CCND1–29 | rs3212907 | C/T | 10/147 | 70/747 | 0.43 |
Abbreviations: dbSNP, single nucleotide polymorphism database; NA, not available.
Typed in only 222 controls.
Number of cases or controls carrying the minor allele/total number of individuals successfully genotyped.