Table III.
Nineteen clones that were different in their ORF from those predicted annotations in the genome database
| Families | Locus ID | New GenBank Accessions | ORF in bp
|
Differences (Ours VS MIPS)1 | |
|---|---|---|---|---|---|
| MIPS | Ours | ||||
| MYB | At1g14600 | AJ630486 | 252 | 768 | 33 bp deleted and 549 bp added at 219 |
| ABI3/VP1 | At1g28300 | AJ630496 | 1,092 | 1,089 | 3 bp deleted at 1,011 |
| WRKY (Zn) | At1g29280 | AJ630494 | 780 | 762 | 18 bp omitted from codon 1 |
| AP2/EREBP | At1g79700 | AJ580379 | 927 | 912 | 6 bp deleted at 171, 9 bp deleted at 250 |
| C2H2 (Zn) | At3g01030 | AJ630491 | 1,062 | 1,116 | 54 bp added at 633 |
| MYB | At3g10000 | AJ630487 | 1,491 | 1,446 | 13 bp added and 58 bp deleted at 368 |
| CPP (Zn) | At3g16160 | AJ630495 | 1,083 | 1,107 | 3 bp deleted at 137, 6 bp added at 405, 16 bp added and 4 bp deleted at 630, 9 bp added at 716 |
| AP2-EREBP | At3g23230 | AJ580377 | 369 | 420 | 51 bp added at 293 |
| ABI3/VP1 | At3g26790 | AJ630497 | 942 | 933 | 9 bp deleted at 715 |
| C2H2 (Zn) | At3g27970 | AJ630492 | 1,065 | 1,074 | 9 bp added at 315 |
| MYB | At4g12670 | AJ630488 | 1,563 | 1,500 | 63 bp deleted at 1,232 |
| MYB | At4g39160 | AJ630489 | 1,638 | 1,806 | 168 bp added at 49 |
| C2H2 (Zn) | At5g03150 | AJ630493 | 1,506 | 1,512 | 6 bp added at 187 |
| MYB | At5g17780 | AJ630490 | 1,260 | 1,254 | 6 bp deleted at 418 |
| bHLH | At5g38860 | AJ630499 | 1,062 | 897 | 165 bp deleted at 665 |
| AP2/EREBP | At5g50080 | AJ580378 | 663 | 663 | 27 bp deleted at 75, 27 bp added at 202 |
| bHLH | At5g53210 | AJ630498 | 885 | 1,095 | 210 bp added at 583. |
| C2H2 (Zn) | At5g54360 | AJ630500 | 813 | 763 | 9 bp deleted at 681, 24 bp deleted at 697, 17 bp deleted at 750 |
| bHLH | At5g61270 | AJ630484 | 804 | 837 | 19 bp added at 159, 14 bp added at 245 |
1
All nucleotide positions started from A of the translation initiation codon.