Table I.
Highlights of FLARE genes with known or putative roles in signal transduction
| Change after Treatment
|
||||
|---|---|---|---|---|
| Gene Description | AGI Number | Cells | Cells | Seedlings |
| 30 min | 60 min | 30 min | ||
| WRKY transcription factors | ||||
| AtWRKY29 | At4g23550 | 6.1 | 44 | 4.7 |
| AtWRKY53 | At4g23810 | 22 | 9.8 | 34.6 |
| AtWRKY28 | At4g18170 | – | – | 32.2 |
| AtWRKY22 | At4g01250 | 24.5 | 14.4 | 24.1 |
| AtWRKY33 | At2g38470 | 4.6 | 12.3 | 28.6 |
| AtWRKY11 | At4g31550 | 5 | 7 | 13.0 |
| AtWRKY15 | At2g23320 | – | 2.7 | 4.3 |
| AtWRKY6 | At1g62300 | – | 2.7 | 7.3 |
| AtWRKY7 | At4g24240 | – | – | 3.1 |
| Protein turnover | ||||
| RING-H2 finger protein, RHA3b | At4g35480 | – | – | 28.0 |
| RING-H2 finger protein, RHA1b | At4g11360 | – | 9.6 | 4.6 |
| AtRMA1 protein | At4g03510 | – | 8.3 | – |
| AtPUB12 | At2g28830 | 2.0 | 11.5 | 4.9 |
| Putative RING finger protein | At2g42360 | – | 4.1 | 10.3 |
| Putative RING finger protein | At3g16720 | 3.6 | 2.7 | 8.4 |
| AtPUB5 | At4g36550 | 4.5 | 2.5 | 5.1 |
| Putative RING finger protein | At4g26400 | – | – | 4.9 |
| Putative RING finger protein | At2g35000 | 2.6 | 3.2 | 3.9 |
| Putative RING finger protein | At2g42350 | – | 2.8 | – |
| Similar to RING Zn finger protein | At2g44410 | – | 2.7 | – |
| RING-H2 finger protein, ATL6 | At3g05200 | – | – | 4.0 |
| Hormone signaling | ||||
| Axi 1-like protein | At2g44500 | 5.9 | – | 4.7 |
| Putative auxin-regulated protein | At2g46690 | −2.6 | – | – |
| Auxin transport protein, PIN3 | At1g70940 | – | −3.3 | – |
| Early auxin-induced, IAA13 | At2g33310 | −2.6 | −3.2 | – |
| Early auxin-induced, IAA5 | At1g15580 | – | −6.6 | – |
| Putative auxin-induced protein | At2g16580 | −2.1 | −9.3 | – |
| Similar to auxin-regulated gene | At4g34750 | – | – | −2.7 |
| SAUR-AC1 | At4g38850 | – | – | −8.0 |
| Putative auxin-induced protein | At2g21210 | – | – | −9.0 |
| Auxin-induced protein-like | At4g38840 | – | – | −14.2 |
| Putative auxin-induced protein | At4g38860 | – | – | −23.6 |
Average relative values of flg22-treated samples, compared to control samples, from two independent experiments. Numbers show the factor of change between control and treatments; positive values represent up-regulation (e.g. 5 = 5-fold increase), negative values down-regulation (e.g. −5 = 5-fold decrease). Expression changes of less than 2-fold between control and treatment are indicated by a dash (–).