Table IV.
Frequency of occurrence of conserved binding motifs for different types of transcription factors in the cluster containing AtACRE31 ortholog
| Transcription Factor Type | Motif Sequences | Frequency in flg22-Regulated Promoters (48 Promoters) | Frequency in Non-flg22-Regulated Promoters (500 Promoters) | Frequency Fold Change |
|---|---|---|---|---|
| AP2/EREBP (GCC-box) | GCCGCC | 0.10 | 0.08 | 1.25 |
| AP2/EREBP | ACCGCC | 0.10 | 0.09 | 1.11 |
| Myb | G(G/T)T(A/T)G(G/T)T | 2.10 | 1.40 | 1.50 |
| bZIP (TGA-type) | TGACG | 1.27 | 0.88 | 1.44 |
| bZIP (GBF-type) | CACGTG | 0.20 | 0.15 | 1.33 |
| bZIP (G/HBF-1 type) | CCTACC | 0.12 | 0.12 | – |
| EIN3/EIL | GGATGTA | 0.06 | 0.04 | 1.5 |
| WRKY (core) | TTGAC | 4.10 | 2.05 | 2.0 |
| WRKY (stringent) | TTGAC(T/C) | 2.35 | 1.09 | 2.35 |
| WRKY (stringent) | TTGACT | 1.6 | 0.7 | 2.3 |
| WRKY (stringent) | TTGACC | 0.75 | 0.42 | 1.78 |
| WRKY (stringent) | TTGACTT | 0.69 | 0.28 | 2.46 |
| W like | TTTGACA | 0.60 | 0.30 | 2.0 |
In bold are the frequencies of over-representative elements that are at least twice the statistical expected frequency that occur within a set of 500 non-flg22 regulated promoters.