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. 2016 Dec 8;7:1834. doi: 10.3389/fpls.2016.01834

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Copyright © 2016 Zhang, Zhao, Li, Yuan, He, Yang, Qu, Ma and Qu.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Venn diagram of DEGs in the Pi21-RNAi line compared with Nip within 72 hpi. A set of 1109 genes exhibited significant differential expression between two genotypes infected with both isolates. We identified 103 (86 up-regulated and 17 down-regulated) DEGs, 281 (64 up-regulated and 281 down-regulated) DEGs, 209 (147 up-regulated and 62 down-regulated) DEGs, 69 (52 up-regulated and 17 down-regulated) DEGs, and 678 (455 up-regulated and 223 down-regulated) DEGs in the Pi21-RNAi line at 0, 12, 24, 48, and 72 hpi compared with that in Nip, respectively. Blue represents DEGs between two genotypes infected with GUY-11. Yellow represents DEGs between two genotypes infected with TMC-1.