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. 2004 Aug 17;32(14):4411–4419. doi: 10.1093/nar/gkh775

Table 1. Oligonucleotides targeted to the MDR1 gene and scrambled/mismatched controls.

Name Target Sequence Chemical property
5995 AUG start codon of MDR1 5′-CCA TCC CGA CCT CGC GCT CC-3 PS
10 221 Scrambled control of 5995 5′-CAC CAC CCC CCT CGC TGG TC-3 PS
13 758 AUG start codon of MDR1 5′-CCA TCC CGA CCT CGC GCT CC-3 PS, 2′-O-ME and PS
13 753 Scrambled control of 13 758 5′-CAC CAC CCC CCT CGC TGG TC-3 PS, 2′-O-ME and PS
GS1954 AUG start codon of MDR1 6′-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ HNA
GS1955 Mismatched control of GS1954 6′-CCA TAC CAA CAT CAC GCT CC-propanediol-4′ HNA
GS1956 AUG start codon of MDR1 6′-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ PS, HNA
GS1957 Mismatched control of GS1956 6′-CCA TAC CAA CAT CAC GCT CC-propanediol-4′ PS, HNA
GS1962 AUG start codon of MDR1 6′-fl-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ HNA
GS1964 AUG start codon of MDR1 6′-fl-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ PS, HNA

PS, phosphorothioate internucleotide linkage; 2′-O-ME, 2′-O-methoxyethylribonucleoside; HNA, HNA with phosphodiester internucleotide linkage; fl: fluorescein.

Non-italic, phosphodiester; italic, phosphorothioate; bold, 2'-O-ME; underline, HNA.