Table 1. Oligonucleotides targeted to the MDR1 gene and scrambled/mismatched controls.
Name | Target | Sequence | Chemical property |
---|---|---|---|
5995 | AUG start codon of MDR1 | 5′-CCA TCC CGA CCT CGC GCT CC-3′ | PS |
10 221 | Scrambled control of 5995 | 5′-CAC CAC CCC CCT CGC TGG TC-3′ | PS |
13 758 | AUG start codon of MDR1 | 5′-CCA TCC CGA CCT CGC GCT CC-3′ | PS, 2′-O-ME and PS |
13 753 | Scrambled control of 13 758 | 5′-CAC CAC CCC CCT CGC TGG TC-3′ | PS, 2′-O-ME and PS |
GS1954 | AUG start codon of MDR1 | 6′-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ | HNA |
GS1955 | Mismatched control of GS1954 | 6′-CCA TAC CAA CAT CAC GCT CC-propanediol-4′ | HNA |
GS1956 | AUG start codon of MDR1 | 6′-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ | PS, HNA |
GS1957 | Mismatched control of GS1956 | 6′-CCA TAC CAA CAT CAC GCT CC-propanediol-4′ | PS, HNA |
GS1962 | AUG start codon of MDR1 | 6′-fl-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ | HNA |
GS1964 | AUG start codon of MDR1 | 6′-fl-CCA TCC CGA CCT CGC GCT CC-propanediol-4′ | PS, HNA |
PS, phosphorothioate internucleotide linkage; 2′-O-ME, 2′-O-methoxyethylribonucleoside; HNA, HNA with phosphodiester internucleotide linkage; fl: fluorescein.
Non-italic, phosphodiester; italic, phosphorothioate; bold, 2'-O-ME; underline, HNA.