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. 2016 Dec 8;6:38439. doi: 10.1038/srep38439

Figure 1. Principal component analysis (PCA) of normalized read counts after variance stabilizing transformation in DESeq2.

Figure 1

The first two principal components are plotted for (a) All genes (n = 14,767), (b) protein coding genes (n = 12,643) and (c) microRNAs (n = 335). Transcripts with mean read count < 50 were excluded.