Table 1. Transcriptome statistics.
Assembled Transcripts | Number of Sequences |
---|---|
Total transcripts | 278,812 |
HiSeq | 75,175 |
MiSeq | 45,524 |
PacBio | 158,113 |
Set of nonredundant transcripts | |
Number of unique transcripts | 33,113 |
Average length | 1144 |
Shortest transcript | 300 |
Longest transcript | 13,236 |
N50 | 1386 |
Functional annotation statistics for the nonredundant set | |
Annotated | 30,839 |
Informative | 26,568 |
Uninformative | 3923 |
Unannotated | 1243 |
Contaminants | 1399 |