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. 2004 Sep;48(9):3358–3366. doi: 10.1128/AAC.48.9.3358-3366.2004

TABLE 2.

Primer sequences

Name Sequencea Annealing site Restriction enzyme
GFPf 5′-GGG ATCGAT ATGAGTAAAGGA-3′ +1 (GFP) ClaI
URA3r 5′-AAA CTGCAG AAGGACCACCTTT-3′ +924 (URA3) PstI
5′CDR4f 5′-CCC GGTACC GGCTAGCAGTTTGAG-3′ −325 (CDR4) KpnI
5′CDR4r 5′-GG CTCGAG CGCATCTGCTGCAGG-3′ +1764 (CDR4) XhoI
3′CDR4f 5′-CACCTGCAGGGGTGCAATGCA-3′ +2366 (CDR4) None
3′CDR4r 5′-CCCG AGCTC CAACGTTTACGTCT-3′ +4458 (CDR4) SacI
MDR1pf 5′-CAA CTCGAG CACACAGCCGTGAATCTTA-3′ −5421 (CaMDR1) XhoI
MDR1pr 5′-CCC ATCGAT GTGAAGTTCTATGTAAGTAGATG-3′ −1 (CaMDR1) ClaI
CDR1pf 5′-CC CTCGAG GTTACTCAATAAGTATTAA-3′ −1182 (CDR1) XhoI
CDR1pr 5′-CC ATCGAT AATTTTTTTCTTTTTGACC-3′ −1 (CDR1) ClaI
CDR2pf 5′-CC CTCGAG ACTAGAAGGTTATCAAGA-3′ −866 (CDR2) XhoI
CDR2pr 5′-CCC ATCGAT ATGTTTTTATTGTATGTG-3′ −1 (CDR2) ClaI
ACT1pf 5′-CC CTCGAG AGAGCTATTAAGATCACCAG-3′ −1017 (ACT1) XhoI
ACT1pr 5′-CC ATCGAT TTTGAATGATTATATTTTTTT-3′ −1 (ACT1) ClaI
E 5′CCACATCAGGAGATTATTCGAGCT-3′ −399 (CDR4) None
B 5′-ACATCACCATCTAATTCAACAAG-3′ +42 (GFP) None
C′ 5′-TTTCCTATGAATCCACTATTGAACC-3′ +208 (URA3) None
F 5′-TCCCTGATAGCACTTGGCATTTAT-3′ +4630 (CDR4) None
G 5′-GGAGTTCTTCGGAAATTGACCATAAAA-3′ +1847 (CDR4) None
a

Recognition sequences used for the ligation of PCR products are shown in italic type. Sequences correspond to genes of C. albicans, except for the yEGFP gene from Aqueroea victoria (19) and hisG for Salmonella enterica serovar Typhimurium ATP phosphoribosyltransferase (9, 26).