Fig 6. SNP Phasing and Deconvolution in Two Loci.

The selected loci contain proximate SNPs that are private to 005 and 047. A) Four SNPs in a 1kb window with ticks of 50 bp (np 3,800–4,800). B) Three SNPs in 300bp window with 50 bp ticks (np 11,200–11,500). Read counts for each of the SNPs are shown In Table 1. MiSeq and MinION mixture alignments are the top two tracks. Phasing and deconvoluted read sets make up the middle and bottom sets of tracks. The middle two tracks are the reads that represent 005 and the bottom two tracks are the reads that represent 047.