Table 1. SNP Read Counts in Two Loci.

Read counts for each of the SNPs shown in Fig 6, which correspond to the six tracks. Counts of the four SNPs in np 3,800–4,800.

	3849 np	4553 np	4736 np	4769 np
MinION:Mixture	A: 146 (43%)	T: 207 (54%)	T: 220 (57%)	A: 49 (13%)
(005 and 047)	G: 180 (53%)	C: 147 (38%)	C: 150 (39%)	G: 313 (84%)
	Other: 14 (4%)	Other: 30 (8%)	Other: 17 (4%)	Other: 11 (3%)
MiSeq: Mixture	A: 1744 (49%)	T: 866 (52%)	T: 951 (84%)	A: 6 (<1%)
(005 and 0047)	G: 1816 (51%)	C: 771 (47%)	C: 178 (16%)	G: 948 (98%)
	Other: 19 (<1%)	Other: 22 (1%)	Other: 6 (<1%)	Other: 12 (1%)
MinION: 005	A: 4 (4%)	T: 92 (84%)	T: 95 (88%)	A: 13 (13%)
(Phased)	G: 88 (93%)	C: 8 (7%)	C: 8 (7%)	G: 87 (85%)
	Other: 3 (3%)	Other: 10 (9%)	Other: 5 (5%)	Other: 2 (2%)
MiSeq:005	A: 12 (1%)	T: 866 (97%)	T: 951 (100%)	A: 3 (<1%)
(Deconvolved)	G: 1816 (98%)	C: 6 (1%)	C: 0 (0%)	G: 830 (99%)
	Other: 17 (1%)	Other: 21 (2%)	Other: 4 (<1%)	Other: 9 (1%)
MinION: 047	A: 94 (88%)	T: 28 (24%)	T: 35 (31%)	A: 12 (11%)
(Phased)	G: 10 (9%)	C: 84 (74%)	C: 73 (64%)	G: 100 (88%)
	Other: 3 (3%)	Other: 2 (2%)	Other: 6 (5%)	Other: 1 (1%)
Miseq: 047	A: 2991 (100%)	T: 3 (<1%)	T: 3 (1%)	A: 1 (<1%)
(Deconvolved)	G: 15 (<1%)	C: 1720 (100%)	C: 354 (99%)	G: 825 (100%)
	Other: 0 (0%)	Other: 0 (0%)	Other: 0 (0%)	Other: 1 (<1%)