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. 2004 Jul 8;23(14):2723–2733. doi: 10.1038/sj.emboj.7600294

Table 2.

Summary of data collection, phasing, and refinement statistics

  Native Se-Met
Data collection (APS-SerCAT)
Wavelength (Å) 1.0722 0.97932 (Se peak)
Resolution limit (Å) 2.1 3.5
No. of measured reflections (last shella) 97 523 (12874) 71 697 (5795)
No. of unique reflections (last shell) 25 594 (3464) 11 212 (900)
Redundancy (last shell) 3.8 (3.7) 6.4 (6.43)
Completeness (last shell) (%) 94.3 (99.1) 99.6 (100)
I/sigma (last shell) 6.95 (2.74) 21.65 (17.0)
Rsym (last shell) (%)b 11.6 (55.0) 6.5 (8.7)
Space group R32 R32
Unit cell dimensions (Å) a=111.06 a=110.84
  c=193.69 c=194.5
No. of complexes in asymmetric unitc 2 2
     
SAD phasing
Phasing resolution (Å)   3.5
Overall figure of meritd   0.33/0.81
     
Refinement
Resolution range (Å) 2.1  
Rwork/Rfree (%) 24.2 (26.2)  
No. of reflections for refinement 24 357 (89.7%)  
No. of reflections for testing set 1236 (4.6%)  
No. of protein residues/non-H atoms 217/1777  
No. of water molecules 98  
R.m.s.d. bond lengths (Å) 0.0057  
R.m.s.d. bond angles (deg) 0.9184  
R.m.s.d. improper angles (deg) 0.6712  
R.m.s.d. dihedral angles (deg) 15.995  
Residues in favored Ramachandran region 98%  
Residues in additionally allowed region 2%  
Residues in generously or disallowed region 0  
Estimated coordinate error (Å) 0.29  
     
Average B-factor for    
 Main-chain atoms 49.9  
 Side-chain atoms 54.8  
 Water molecules 70.9  
 All atoms 53.8  
     
B value r.m.s.d. for    
 Bonded main-chain atoms 1.689  
 Bonded side-chain atoms 2.875  
 Angle main-chain atoms 2.587  
 Angle side-chain atoms
4.472
 
a Last shell is 2.2–2.1 Å for native data and 3.6–3.5 Å for Se-Met SAD data; all reflections used.
b Rsym=∑∣I−〈I〉∣/∑I.
c Each complex has two molecules with one from PALS1-L27N and the other from PATJ-L27.
d Overall figure of merit after SOLVE/Resolve at the same resolution.