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. 2004 Sep;186(18):6124–6132. doi: 10.1128/JB.186.18.6124-6132.2004

TABLE 2.

Adjacent RsbRA and RsbS ortholog genes in diverse prokaryotic genomes

Organism RsbRA orthologa E valueb RsbS orthologa E valueb
Bacillus subtilis RsbRA 1e-149 RsbS 6e-52
Listeria monocytogenes NP_464415 7e-68 NP_464416 1e-36
Nostoc punctiforme ZP_00107852 1e-32 ZP_00107851 2e-20
Burkholderia fungorum ZP_00034596 2e-32 ZP_00034597 2e-19
Chloroflexus aurantiacus ZP_00018003 4e-32 Nonec
Pseudomonas fluorescens ZP_00084339 2e-31 ZP_00084338 4e-16
Cytophaga hutchinsonii ZP_00117139 8e-30 ZP_00117138 4e-20
Xanthomonas campestris NP_636545 2e-29 NP_636546 1e-18
Streptomyces coelicolor NP_631378 1e-27 NP_631377 2e-16
Vibrio vulnificus NP_762059 2e-26 NP_762060 1e-09
Thermoanaerobacter tengcongensis NP_622693 1e-24 NP_622694 5e-17
Chromobacterium violaceum NP_900548 2e-23 NP_900549 1e-07
a

For organisms other than B. subtilis, each ortholog is indicated by its accession number in the NCBI Protein Database. Organisms are listed by similarity of their RsbRA orthologs to B. subtilis RsbRA.

b

E value for the alignment resulting from a BLASTP search (5) of proteins available in the NCBI Microbial Genomes Database, using the default parameters of the on-site program. Only the most similar ortholog for a given bacterium is shown.

c

Gene encoding the most similar C. aurantiacus RsbRA ortholog (ZP_00018003) is flanked by genes for additional RsbRA paralogs, from a total of 18 such genes in the organism. The gene for an RsbS ortholog (ZP_00018452; 5e-17) is not adjacent to any of these RsbRA-like genes.