Table 3.
The average number of aligned couples (i.e., |π|) and the average of share of nodes in LCSC (i.e., |L C S C|/|V 1|). We use α=0.7 for SPINAL, IsoRank, MAGNA and L-GRAAL, and r=1 for PROPER
| Algorithms | |π| | |L C S C|/|V 1| |
|---|---|---|
| PROPER (ℓ=150) | 5521.2 | 0.528 |
| PROPER (ℓ=600) | 5320.5 | 0.728 |
| SPINAL I | 6364.3 | 0.219 |
| SPINAL II | 6433.4 | 0.720 |
| PINALOG | 3740.9 | 0.233 |
| L-GRAAL | 5616.4 | 0.726 |
| MAGNA++(S 3) | 6647.8 | 0.292 |
| MAGNA++(EC) | 6647.8 | 0.353 |
| IsoRank | 6647.8 | 0.051 |
The best value for each column is highlighted in boldface