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. 2016 Dec 13;11(12):e0168060. doi: 10.1371/journal.pone.0168060

Table 2. Primers used in this study.

Primer Sequencea, b Purpose
PAampG-F 5’GGGATCCCAACGCGCACGCTTGCGCGAGGA 3’(BamHI) Cloning of ampG of PAO1
PAampG-R 5’GAAGCTTTCAGTGCTGCTCGGCGTTCTGGT3’(HindIII)
ECampG-F 5’GGGATCCATGTCCAGTCAATATTTACG 3’(BamHI) Cloning of ampG of E.coli 7
ECampG-R 5’GAAGCTTTTACGTCAGATGCGTTTTTCG 3’(HindIII)
ABampG-F 5’GGGATCCATGTTCCGACAGCAAAATCTTTA 3’(BamHI) Cloning of ampG of A. baumannii 2089
ABampG-R 5’GGTCGACTTATACAGTTTTAGCATCTTTCCA 3(SalI)
VCampG-F 5’GGGATCCTAGGTACAAGTAGTTGGGGCCAGG 3’(BamHI) Cloning of ampG of V. cholerae 03
VCampG-R 5’GGTCGACCAGTCCTATTTTAGTAGGTCATTTT 3’(HindIII)
PAampG-G29R 5’AACACCAGCATGGTCGGCAGgcgGGCGGCGAAGCCGAGCA 3’ G29R
PAampG-G29C 5’AACACCAGCATGGTCGGCAGgcaGGCGGCGAAGCCGAGCA3’ G29C
PAampG-G29D 5’AACACCAGCATGGTCGGCAGgtcGGCGGCGAAGCCGAGCA3’ G29N
PAampG-G29A 5’AACACCAGCATGGTCGGCAGggcGGCGGCGAAGCCGAGCA3’ G29A
PAampG-G29V 5’AACACCAGCATGGTCGGCAGgacGGCGGCGAAGCCGAGCA3’ G29V
PAampG-29-R 5’CTGCCGACCATGCTGGTGTTCAACACCCTGTCGGTGTGGC3’
PAampG-A129T 5’TCGATCGCGATGTCCTGGGTggtGGAGGCGAACGCCACCA3’ A129T
PAampG-A129S 5’TCGATCGCGATGTCCTGGGTggaGGAGGCGAACGCCACCA3’ A129S
PAampG-A129P 5’TCGATCGCGATGTCCTGGGTgggGGAGGCGAACGCCACCA3’ A129P
PAampG-A129G 5’TCGATCGCGATGTCCTGGGTgccGGAGGCGAACGCCACCA3’ A129G
PAampG-A129V 5’TCGATCGCGATGTCCTGGGTgatGGAGGCGAACGCCACCA3’ A129G
PAampG-A129D 5’TCGATCGCGATGTCCTGGGTgtcGGAGGCGAACGCCACCA3’ A129N
PAampG-129-R 5’ACCCAGGACATCGCGATCGACGCCTACCGCCTGGAAATCG3’
PAampG-Q131E 5’TAGGCGTCGATCGCGATGTCctcGGTGGCGGAGGCGAACG3’ Q131E
PAampG-Q131P 5’TAGGCGTCGATCGCGATGTCcggGGTGGCGGAGGCGAACG3’ Q131P
PAampG-Q131R 5’TAGGCGTCGATCGCGATGTCccgGGTGGCGGAGGCGAACG3’ Q131R
PAampG-Q131H 5’TAGGCGTCGATCGCGATGTCatgGGTGGCGGAGGCGAACG3’ Q131H
PAampG-131-R 5’GACATCGCGATCGACGCCTACCGCCTGGAAATCGCCGAGG3’
PAampG-A197T 5’AGCCCAGGCAGGATCAGCAGggtGAACAACGCATAGGTCA3’ A197T
PAampG-A197S 5’AGCCCAGGCAGGATCAGCAGggaGAACAACGCATAGGTCA3’ A197S
PAampG-A197G 5’AGCCCAGGCAGGATCAGCAGgccGAACAACGCATAGGTCA3’ A197G
PAampG-A197D 5’AGCCCAGGCAGGATCAGCAGgtcGAACAACGCATAGGTCA3’ A197N
PAampG-197-R 5’CTGCTGATCCTGCCTGGGCTGGTCACCAGCCTGCTGATCC3’
PAampG-FqPCR 5’GCGGTCTCGGTGATGGTGCT 3’ qPCR
PAampG-RqPCR 5’CGCTGGACGAACTCGGTGAT 3’
EC-FqPCR 5’TGATGGACCGCTACACGC 3’ qPCR
EC-RqPCR 5’ACCCAGAACGCTGATTGC 3’
AB-FqPCR 5’ACAGGCGCAACTCAAGAT 3’ qPCR
AB-RqPCR 5’CCCAATAAAGCAGCAACA 3’
VC-FqPCR 5’TGACTGGCTGGCTGAAAG 3’ qPCR
VC-RqPCR 5’CGATGGATTGGCAGAAAA 3’
RpoD-FqPCR 5’CCGTTGCTGAATATCCGGAA 3’ qPCR
RpoD-RqPCR 5’CAAATTTTTCGCGAGCCAGT 3’

a: The underlined sequences are restriction endonuclease sites.

b: The nucleotide sequence corresponding to the mutated amino acids are in lowercase.