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. 2015 Jan 5;5:7616. doi: 10.1038/srep07616

Table 2. Primers and probes used in this study.

  Assay Orientation Sequences (5′-3′) Final concentration Amplicon size (bp) Reference
1 Cotton F CACATGACTTAGCCCATCTTTGC 200 76 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-002.pdf
    R CCCACCCTTTTTTGGTTTAGC 200    
    P FAM-TGCAGGTTTTGGTGCCACTGTGAATG-BHQ1 200    
2 Maize F CGTCGTTTCCCATCTCTTCCTCC 300 135 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-006.pdf
    R CCACTCCGAGACCCTCAGTC 300    
    P FAM-AATCAGGGCTCATTTTCTCGCTCCTCA-BHQ1 200    
3 Rapeseed F GGCCAGGGTTTCCGTGAT 200 101 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-001.pdf
    R CCGTCGTTGTAGAACCATTGG 200    
    P FAM-AGTCCTTATGTGCTCCACTTTCTGGTGCA-BHQ1 200    
4 Rice F TGGTGAGCGTTTTGCAGTCT 200 68 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-OS-002.pdf
    R CTGATCCACTAGCAGGAGGTCC 200    
    P FAM-TGTTGTGCTGCCAATGTGGCCTG-BHQ1 200    
5 Soybean F CCAGCTTCGCCGCTTCCTTC 150 74 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-005.pdf
    R GAAGGCAAGCCCATCTGCAAGCC 150    
    P FAM-CTTCACCTTCTATGCCCCTGACAC-BHQ1 50    
6 Bar F ACAAGCACGGTCAACTTCC 140 60 Grohmann et al, 200939
    R GAGGTCGTCCGTCCACTC 140    
    P FAM-TACCGAGCCGCAGGAACC-BHQ1 100    
7 Cry1Ab F GGGAAATGCGTATTCAATTCAAC 300 129 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-ELE-00-003.pdf
    R TTCTGGACTGCGAACAATGG 300    
    P FAM-ACATGAACAGCGCCTTGACCACAGC-BHQ1 160    
8 P-CaMV35S F CATCATTGCGATAAAGGAAAGGC 400 125 In laboratory
    R TGCTTTGAAGACGTGGTTGGA 400    
    P FAM-TCGTGGGTGGGGGTC-MGBNFQ 200    
9 P-FMV35S F AAGACATCCACCGAAGACTTA 200   National standard SN/T 1204-200340
    R AGGACAGCTCTTTTCCACGTT 200    
    P FAM-TGGTCCCCACAAGCCAGCTGCTCGA-BHQ1 100    
10 T-NOS F ATCGTTCAAACATTTGGCA 200   National standard SN/T 1204-200340
    R ATTGCGGGACTCTAATCATA 200    
    P FAM-CATCGCAAGACCGGCAACAGG-BHQ1 100    
11 NPTII F CTATGACTGGGCACAACAGACA 800 101 Announcement by the Ministry of Agriculture No.1782-2-201241
    R CGGACAGGTCGGTCTTGACA 800    
    P FAM-CTGCTCTGATGCCGCCGTGTTCCG-BHQ1 400    
12 PAT F CGCGGTTTGTGATATCGTTAAC 400   Zeitler et al, 200242
    R TCTTGCAACCTCTCTAGATCATCAA 400    
    P FAM-AGGACAGAGCCACAAACACCACAAGAGTG-BHQ1 200    
13 MON531 F TCCCATTCGAGTTTCTCACGT 150 72 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-004.pdf
    R AACCAATGCCACCCCACTGA 150    
    P FAM-TTGTCCCTCCACTTCTTCTC-BHQ1 50    
14 MON88913 F GGCTTTGGCTACCTTAAGAGAGTC 500 94 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-007.pdf
    R CAAATTACCCATTAAGTAGCCAAATTAC 500    
    P FAM-AACTATCAGTGTTTGACTACAT-MGBNFQ 100    
15 MON1445 F GGAGTAAGACGATTCAGATCAAACAC 150 87 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-003.pdf
    R ATCGACCTGCAGCCCAAGCT 150    
    P FAM-ATCAGATTGTCGTTTCCCGCCTTCAGTTT-BHQ1 50    
16 MON15985 F GTTACTAGATCGGGGATATCC 150 82 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-005.pdf
    R AAGGTTGCTAAATGGATGGGA 150    
    P FAM-CCGCTCTAGAACTAGTGGATCTGCACTGAA-BHQ1 50    
17 LLCotton25 F CAGATTTTTGTGGGATTGGAATTC 400 79 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-002.pdf
    R CAAGGAACTATTCAACTGAG 400    
    P FAM-CTTAACAGTACTCGGCCGTCGACCGC-BHQ1 200    
18 GHB614 F CAAATACACTTGGAACGACTTCGT 400 120 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GH-006.pdf
    R GCAGGCATGCAAGCTTTTAAA 400    
    P FAM-CTCCATGGCGATCGCTACGTTCTAGAATT-BHQ1 200    
19 3272 F TCATCAGACCAGATTCTCTTTTATGG 50 95 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-019.pdf
    R CGTTTCCCGCCTTCAGTTTA 900    
    P FAM-ACTGCTGACGCGGCCAAACACTG-BHQ1 200    
20 59122 F GGGATAAGCAAGTAAAAGCGCTC 250 86 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-012.pdf
    R CCTTAATTCTCCGCTCATGATCAG 250    
    P FAM-TTTAAACTGAAGGCGGGAAACGACAA-BHQ1 200    
21 Bt176 F GGCCGTGAACGAGCTGTT 300 82 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-023.pdf
    R GGGAAGAAGCCTACATGTTTTCTAA 600    
    P FAM-AGCAACCAGATCGGCCGACACC-BHQ1 200    
22 Bt11 F GCGGAACCCCTATTTGTTTA 750 70 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-006.pdf
    R TCCAAGAATCCCTCCATGAG 750    
    P FAM-AAATACATTCAAATATGTATCCGCTCA-BHQ1 250    
23 GA21 F CTTATCGTTATGCTATTTGCAACTTTAGA 150 112 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-007.pdf
    R TGGCTCGCGATCCTCCT 150    
    P FAM-CATATACTAACTCATATCTCTTTCTCAACAGCAGGTGGGT-BHQ1 50    
24 MIR 162 F GCGCGGTGTCATCTATGTTACTAG 300 92 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-022.pdf
    R TGCCTTATCTGTTGCCTTCAGA 300    
    P FAM-TCTAGACAATTCAGTACATTAAAAACGTCCGCCA-BHQ1 150    
25 MIR604 F GCGCACGCAATTCAACAG 600 76 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-013.pdf
    R GGTCATAACGTGACTCCCTTAATTCT 300    
    P FAM-AGGCGGGAAACGACAATCTGATCATG-BHQ1 200    
26 MON810 F TCGAAGGACGAAGGACTCTAACGT 300 92 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-020.pdf
    R GCCACCTTCCTTTTCCACTATCTT 300    
    P FAM-AACATCCTTTGCCATTGCCCAGC-BHQ1 180    
27 MON863 F GTAGGATCGGAAAGCTTGGTAC 150 84 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-009.pdf
    R TGTTACGGCCTAAATGCTGAACT 150    
    P FAM-TGAACACCCATCCGAACAAGTAGGGTCA-BHQ1 50    
28 MON88017 F GAGCAGGACCTGCAGAAGCT 150 95 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-016.pdf
    R TCCGGAGTTGACCATCCA 150    
    P FAM-TCCCGCCTTCAGTTTAAACAGAGTCGGGT-BHQ1 50    
29 MON89034 F TTCTCCATATTGACCATCATACTCATT 450 77 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-018.pdf
    R CGGTATCTATAATACCGTGGTTTTTAA 450    
    P FAM-ATCCCCGGAAATTATGTT-MGBNFQ 100    
30 NK603 F ATGAATGACCTCGAGTAAGCTTGTTAA 150 108 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-008.pdf
    R AAGAGATAACAGGATCCACTCAAACACT 150    
    P FAM-TGGTACCACGCGACACACTTCCACTC-BHQ1 50    
31 T25 F ACAAGCGTGTCGTGCTCCAC 400 102 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-011.pdf
    R GACATGATACTCCTTCCACCG 400    
    P FAM-TCATTGAGTCGTTCCGCCATTGTCG-BHQ1 200    
32 TC1507 F TAGTCTTCGGCCAGAATGG 300 58 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-ZM-010.pdf
    R CTTTGCCAAGATCAAGCG 300    
    P FAM-TAACTCAAGGCCCTCACTCCG-BHQ1 150    
33 MS1 F ACGCTGCGGACATCTACATT 400 187 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-005.pdf
    R CTAGATCGGAAGCTGAAGATGG 400    
    P FAM-CTCATTGCTGATCCACCTAGCCGACTT-BHQ1 200    
34 Topas 19/2 F GTTGCGGTTCTGTCAGTTCC 400 95 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-008.pdf
    R AGTTCCAAACGTAAAACGGCTT 400    
    P FAM-TCCCGGTCATATATCAGCGCCGGTC-BHQ1 200    
35 OXY-235 F AGAGAATCGTGAAATTATCTCTACCG 300 105 Wu G. et al, 200843
    R ATTGACCATCATACTCATTGCTGA 300    
    P FAM-CCATGTAGATTTCCCGGACATGAAGCC-BHQ1 150    
36 MS8 F GTTAGAAAAAGTAAACAATTAATATAGCCGG 400 130 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-002.pdf
    R GGAGGGTGTTTTTGGTTATC 400    
    P FAM-AATATAATCGACGGATCCCCGGGAATTC-BHQ1 200    
37 RF3 F AGCATTTAGCATGTACCATCAGACA 400 139 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-003.pdf
    R CATAAAGGAAGATGGAGACTTGAG 400    
    P FAM-CGCACGCTTATCGACCATAAGCCCA-BHQ1 200    
38 RT73 F CCATATTGACCATCATACTCATTGCT 150 108 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-004.pdf
    R GCTTATACGAAGGCAAGAAAAGGA 150    
    P FAM-TTCCCGGACATGAAGATCATCCTCCTT-BHQ1 50    
39 T45 F CAATGGACACATGAATTATGC 400 123 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-BN-001.pdf
    R GACTCTGTATGAACTGTTCGC 400    
    P FAM-TAGAGGACCTAACAGAACTCGCCGT-BHQ1 200    
40 TT51-1 F GCGTCCAGAAGGAAAAGGAATA 800 120 Wu et al, 201344
    R AGAGACTGGTGATTTCAGCGGG 800    
    P FAM-ATCTGCCCCAGCACTCGTCCG-BHQ1 400    
41 GTS40-3-2 F TTCATTCAAAATAAGATCATACATACAGGTT 150 84 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-005.pdf
    R GGCATTTGTAGGAGCCACCTT 150    
    P FAM-CCTTTTCCATTTGGG-MGBNFQ 50    
42 A2704-12 F GCAAAAAAGCGGTTAGCTCCT 400 64 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-004.pdf
    R ATTCAGGCTGCGCAACTGTT 400    
    P FAM-CGGTCCTCCGATCGCCCTTCC-BHQ1 200    
43 MON 89788 F TCCCGCTCTAGCGCTTCAAT 150 139 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-006.pdf
    R TCGAGCAGGACCTGCAGAA 150    
    P FAM-CTGAAGGCGGGAAACGACAATCTG-BHQ1 50    
44 DP-356043 F GTCGAATAGGCTAGGTTTACGAAAAA 750 99 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-009.pdf
    R TTTGATATTCTTGGAGTAGACGAGAGTGT 750    
    P FAM-CTCTAGAGATCCGTCAACATGGTGGAGCAC-BHQ1 200    
45 A5547-127 F GCTATTTGGTGGCATTTTTCCA 400 75 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-007.pdf
    R CACTGCGGCCAACTTACTTCT 400    
    P FAM-CCGCAATGTCATACCGTCATCGTTGT-BHQ1 200    
46 CV-127 F AACAGAAGTTTCCGTTGAGCTTTAAGAC 400 88 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-011.pdf
    R CATTCGTAGCTCGGATCGTGTAC 400    
    P FAM-TTTGGGGAAGCTGTCCCATGCCC-BHQ1 100    
47 DP-305423 F CGTGTTCTCTTTTTGGCTAGC 800 93 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-008.pdf
    R GTGACCAATGAATACATAACACAAACTA 500    
    P FAM-TGACACAAATGATTTTCATACAAAAGTCGAGA-BHQ1 220    
48 MON87701 F TGGTGATATGAAGATACATGCTTAGCAT' 600 89 http://gmo-crl.jrc.ec.europa.eu/gmomethods/docs/QT-EVE-GM-010.pdf
    R CGTTTCCCGCCTTCAGTTTAAA 600    
    P TCAGTGTTTGACACACACACTAAGCGTGCC 250