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. 2016 Dec 14;6:39082. doi: 10.1038/srep39082

Table 2. In silico predicted residual activity of CYP21A2 stability mutants lacking functional assays.

Variant Patient’s second mutation (% REA) Patient’s phenotype Expected activity of the variant ∆∆G In silico activity (%) Reference
p.H38L NA NA ? −1.64 100 26
p.Y47C NA NA ? −1.64 100 27
p.Y59N NA CL 0–5 2.54 4.4 28
p.V69L p.[Q318;.R356] (0) pH62L in cis* SV 5–60 1.47 22.5 29
p.S113Y p.V281L (60) NC 0–60 0.79 63.3 30
p.S113F NA NA ? 1.05 42.6 20
p.Q144P p.P482fs (ND) SW 0 0.61 83.2 29
p.F164S p.I172N (2) SV 0–5 1.37 26.2 29
p.S165P p.I172N (2) NC 10–60 4.94 0.1 31
p.T168N Chimeric gene (0) NC 10–60 3.41 1.2 32
p.V211L NA N? ? −0.91 100 33
p.E238K NA 4 SW, 1 NC 0# −0.33 100 34
p.V249A NA N 100 0.45 100 35
p.L261P c.290-13A/C>G** (0–2) SW 0 8.95 0.01 36
p.M283L p.V281L (60) NC 0–60 −0.3 100 37
p.S301Y c.290-13A/C>G** (0–2) NC 10–60 12.31 0.00 38
p.V304E c.290-13A/C>G** (0–2) SW 0 2.44 5.1 29
p.V305D NA NA ? 0.99 46.6 20
p.F306V NA NA ? 1.87 12.2 20
p.L307V Deletion (0) NC 10–60 2.8 2.9 30
p.R316L p.V281L (60) NC 0–60 0.03 100 30
p.L317M c.290-13A/C>G** (0–2) NC 10–60 −0.8 100 39
p.L317V N NC§ ? 2.42 5.3 40
p.L321P NA NA ? 9.84 0.0 20
p.G381S NA NA ? 3.51 1.0 20
p.N387K p. V281L (60) NC 0–60 7.55 0.0 41
p.F404S p.F404S (ND) SW 0 5.34 0.06 42
p.F404L p.V281L (60) NC 0–60 2.51 4.6 30
p.T450P p.T450P (ND) SW 0 9.35 0.0 42
p.P459H p.[ClEx6; Q318X; A391T] (0) SV 2–5 4.44 0.2 43
p.P459S Chimeric Gene SV 2–5 2.68 3.6 32
p.P459L c.290-13A/C>G** (0–2) SV 0–5 1.29 29.5 29

In silico predicted activities of mutants lacking functional assays were compared with the expected ones. Expected activity was established considering the residual activity of the mutation on the homologous allele and/or the patient’s phenotype when available. In silico enzymatic activities were calculated from the fitting based on the bovine template using the estimated ∆∆G of each of the variants (Table S1). Activities are expressed relative of the wild type protein (100%). *According to functional assays, p.H62L mutation was classified as a mild mutation. Nevertheless, several alleles were described having another mild mutation in cis with decreased enzymatic activities most likely related to the SV form of the disease50,60. **c.290-13A/C>G mutation creates a new acceptor splice site. Patients bearing this mutation have been described presenting either a SW or a SV phenotype8. #The classification of the expected activity for this variant was based on the fact that 4/5 patients presented a SW phenotype. §The patient described by Byounga et al.40, disclosed a 17-OHP post ACTH value of 6, 67 ng/mL. According to the current inclusion criteria, patients would be classified as presenting a NC form of the disease when the post ACTH test is at least 10 ng/mL61. REA: Residual enzymatic activity. NA: Not available, ND: Not determined; N. Normal; NC. Nonclassical; SV: Simple virilizing; SW: Salt wasting; CL: Classical; N: Normal; ClEx6: Cluster Exon 6 mutations. ?: Insufficient data to estimate the expected enzymatic activity.