Table 1.

Finfish and crustacean viruses detected by metagenomics in freshwater environments.

Virus	Abbreviation	Family	Genome	Reference
White spot syndrome virus	WSSV	Nimaviridae	dsDNA	Suttle, 2005; Kim et al., 2015
Taura syndrome disease virus	TSV	Dicistroviridae	ssRNA	Djikeng et al., 2009; Rosario et al., 2009; Kim et al., 2015
Lymphocytic disease virus	LCDV	Iridoviridae	dsDNA	Rosario et al., 2009
Rockbream iridovirus	RBIV	Iridoviridae	dsDNA	Rosario et al., 2009
Atlantic cod nervous necrosis virus	ACNNV	Nodaviridae	ssRNA	Djikeng et al., 2009
Atlantic halibut noda virus	AHNV	Nodaviridae	ssRNA	Djikeng et al., 2009
Red spotted grouper necrosis virus	RSGNV	Nodaviridae	ssRNA	Djikeng et al., 2009
Strip-jack nervous necrosis virus	SJNNV	Nodaviridae	ssRNA	Djikeng et al., 2009; Kim et al., 2015
Infectious spleen and kidney necrosis	ISKNV	Iridoviridae	dsDNA	Kim et al., 2015
Cyprinid herpesvirus 3 (koi herpes virus)	CyHV-3	Herpesviridae	dsDNA	Kim et al., 2015
Shrimp infectious myonecrosis virus	IMNV	Totiviridae	ssRNA	Kim et al., 2015
Viral hemorrhagic septicemia virus	VHSV	Rhabdoviridae	ssRNA	Kim et al., 2015