Table 1. Detected chlorotypes and the genetic diversity identified in this study.
| Population code | Taxon code* | Regional group | Line age | Sample size | Haplo types (no. of individuals) | Hd (SD) | π (SD) |
|---|---|---|---|---|---|---|---|
| I: Qinghai–Xizang Plateau region | 0.799(0.020) | 0.00078(0.00007) | |||||
| XAR | RS, RO | I | A | 13 | H1 (4), H28 (9) | 0.462(0.110) | 0.00062(0.00015) |
| XBR | RO | I | A | 13 | H1 (1), H15 (12) | 0.154(0.126) | 0.00005(0.00004) |
| XCN | RO | I | A | 8 | H30 (8) | 0.000 | 0.00000 |
| XDJ | RO | I | A | 8 | H31 (8) | 0.000 | 0.00000 |
| XMZ | RO | I | A | 6 | H1 (4), H15 (1), H29 (1) | 0.600(0.215) | 0.00022(0.00009) |
| XJL | RO | I | A | 11 | H1 (11) | 0.000 | 0.00000 |
| XNML | RS, RO | I | A | 8 | H1 (4), H29 (4) | 0.571(0.094) | 0.00019(0.00003) |
| XYD | RO | I | A | 12 | H30 (12) | 0.000 | 0.00000 |
| II: Eastern Himalayas & Hengduan Mountains region | 0.579(0.031) | 0.00043(0.00004) | |||||
| SBT | RO | II | A | 6 | H1 (6) | 0.000 | 0.00000 |
| SDC1 | RO | II | A | 16 | H1 (15), H24 (1) | 0.125(0.106) | 0.00025(0.00021) |
| SDC2 | RM | II | A | 20 | H1 (20) | 0.000 | 0.00000 |
| SDC3 | RK | II | A | 8 | H1 (8) | 0.000 | 0.00000 |
| SEM | RO | II | A | 13 | H1 (11), H33 (2) | 0.282(0.142) | 0.00009(0.00005) |
| SKD1 | RS | II | B | 10 | H7 (1), H8 (7), H9 (2) | 0.511(0.164) | 0.00038(0.00012) |
| SKD2 | RO | II | B | 10 | H1 (1), H3 (9) | 0.2(0.154) | 0.00007(0.00005) |
| SLD1 | RO | II | B | 10 | H9 (6), H11 (4) | 0.533(0.095) | 0.00018(0.00003) |
| SLD2 | RS | II | B | 6 | H23 (6) | 0.000 | 0.00000 |
| SXC1 | RM | II | A | 9 | H1 (7), H25 (2) | 0.389(0.164) | 0.00013(0.00006) |
| SXC2 | RK | II | A | 17 | H1 (12), H25 (5) | 0.441(0.098) | 0.00015(0.00003) |
| SXJ1 | RO | II | B | 10 | H36 (8), H37 (2) | 0.356(0.159) | 0.00024(0.00011) |
| SXJ2 | RO | II | B | 15 | H3 (15) | 0.000 | 0.00000 |
| SYJ1 | RS, RO | II | A&C | 18 | H1 (16), H10 (2) | 0.209(0.116) | 0.00007(0.00004) |
| SYJ2 | RO | II | A&C | 18 | H1 (17), H10 (1) | 0.111(0.096) | 0.00004(0.00003) |
| XBM1 | RO | II | A | 10 | H1 (8), H13 (2) | 0.356(0.159) | 0.00012(0.00005) |
| XBM2 | RO | II | A | 7 | H1 (6), H14(1) | 0.286(0.196) | 0.00019(0.00013) |
| XBS1 | RK | II | A | 13 | H1 (7), H13 (6) | 0.538(0.060) | 0.00018(0.00002) |
| XBS2 | RO | II | A | 7 | H1 (7) | 0.000 | 0.00000 |
| XBS3 | RK | II | A | 10 | H1 (9), H13 (1) | 0.200(0.154) | 0.00007(0.00005) |
| XCY | RO | II | A | 7 | H1 (3), H12 (3), H13 (1) | 0.286(0.196) | 0.0001(0.00007) |
| XJD | RO | II | A | 13 | H1 (11), H16 (2) | 0.282(0.142) | 0.00009(0.00005) |
| XLL1 | RK | II | A | 7 | H1 (6), H15(1) | 0.286(0.196) | 0.0001(0.00007) |
| XLL2 | RS | II | A | 7 | H1 (7) | 0.000 | 0.00000 |
| XLZ1 | RO | II | A | 16 | H1 (1), H14 (5), H27 (12) | 0.542(0.098) | 0.00042(0.00010) |
| XLZ2 | RM | II | A | 16 | H1 (14), H15 (1), H28 (1) | 0.242(0.135) | 0.00021(0.00015) |
| XMK1 | RO | II | A | 10 | H1 (10) | 0.000 | 0.00000 |
| XMK2 | RS | II | A | 9 | H1 (6), H12 (3) | 0.5(0.128) | 0.00084(0.00022) |
| XMK3 | RK | II | A | 9 | H1 (8), H12 (1) | 0.222(0.166) | 0.00037(0.00028) |
| YFG | RO, RT | II | A | 15 | H1 (8), H2 (7) | 0.533(0.052) | 0.00018(0.00002) |
| YZD1 | RO | II | A | 10 | H1 (2), H26 (8) | 0.356(0.159) | 0.00024(0.00011) |
| III: Yungui Plateau region | 0.558(0.044) | 0.00045(0.00004) | |||||
| GUWN | RS | III | B | 12 | H3 (10), H19 (2) | 0.303(0.147) | 0.0001(0.00005) |
| SJL | RM | III | B | 10 | H3 (10) | 0.000 | 0.00000 |
| SMG | RS | III | B | 13 | H3 (13) | 0.000 | 0.00000 |
| SMN1 | RS | III | B | 9 | H3 (6), H4 (3) | 0.500(0.128) | 0.00017(0.00004) |
| SMN2 | RS, RO | III | B | 10 | H3 (10) | 0.000 | 0.00000 |
| YDL | RO | III | B | 8 | H1 (3), H5 (2), H6 (3) | 0.536(0.123) | 0.00018(0.00004) |
| YJD | RS | III | B | 12 | H6 (12) | 0.000 | 0.00000 |
| YLQ | RS | III | B | 8 | H1(1), H3 (2), H24 (1), H32 (4) | 0.714(0.123) | 0.00034(0.00007) |
| YTC | RM | III | B | 14 | H3 (14) | 0.000 | 0.00000 |
| YWX | RS | III | B | 11 | H3 (9), H19 (2) | 0.327(0.153) | 0.00011(0.00005) |
| YYD | RO | III | B | 11 | H6 (1), H35 (10) | 0.182(0.144) | 0.00006(0.00005) |
| YZD2 | RO, RZ | III | B | 7 | H3 (7) | 0.000 | 0.00000 |
| IV: Qilian-Qin Mountains region | 0.598(0.0051) | 0.00047(0.00006) | |||||
| GHZ | RO | IV | A | 8 | H14 (5), H15 (3) | 0.536(0.123) | 0.00018(0.00004) |
| GJT | RO | IV | A | 14 | H17 (9), H22 (5) | 0.495(0.088) | 0.00017(0.00003) |
| GYZ | RO | IV | A | 11 | H16 (7), H17 (4) | 0.509(0.101) | 0.00017(0.00003) |
| GZL | RO | IV | A | 12 | H17 (12) | 0.000 | 0.00000 |
| HXS | RO | II | A | 17 | H1 (6), H20 (11) | 0.485(0.079) | 0.00016(0.00003) |
| QDT | RO | IV | A | 13 | H17 (13) | 0.000 | 0.00000 |
| SHPL | RO | II | A | 7 | H1 (7) | 0.000 | 0.00000 |
| SHXA | RO | IV | C | 12 | H18 (8), H21 (4) | 0.485(0.106) | 0.00016(0.00004) |
| SJZ | RO | IV | A | 12 | H6 (1), H7 (8), H17 (3) | 0.530(0.136) | 0.0003(0.00008) |
| SSD | RO | II | A | 14 | H1 (2), H16 (4), H17 (7), H18 (1) | 0.538(0.115) | 0.00029(0.00012) |
| V: Taiwan | |||||||
| THL | MO | V | C | 15 | H33 (15) | 0.000 | 0.00000 |
| Total | 0.815(0.017) | 0.00056(0.00003) | |||||
*RO = Rosa omeiensis, RS = R. sericea, MO = R. morrisonensis, RK = R. sikangensis, RT = R. taronensis, RM = R. mairei, RZ = R. zhongdianensis.