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. 2016 Dec 14;11(12):e0167944. doi: 10.1371/journal.pone.0167944

Table 3. Generic correlating gene expressions with robustness towards heat stress (A) or oxidative stress (B).

A
locustag IL1403 locustag SK11 locustag KF147 locustag MG1363 gene function correlation average P-value maximum P-value
L191486 LACR_1356 LLKF_1201 llmg_1317 yljB/nanE N-acetylmannosamine-6-phosphate 2-epimerase positive 0.025 0.039
L101688 LACR_1561 LLKF_1575 llmg_1029 ypaA hypothetical protein negative 0.026 0.062
L195318 LACR_1054 LLKF_0997 llmg_1551 yjjF/fdhC formate/nitrite transporter negative 0.031 0.059
L89001 LACR_1179 LLKF_1106 llmg_1494 ykiI ABC transporter permease positive 0.035 0.095
L64373 LACR_0052 LLKF_0039 llmg_0075 lplL lipoate-protein ligase positive 0.044 0.116
L143312 LACR_0389 LLKF_0398 llmg_0362 dppA/optS oligopeptide ABC transporter substrate binding protein negative 0.046 0.138
L72684 LACR_1157 LLKF_1090 llmg_1513 ykhE arsenate reductase negative 0.048 0.103
L18206 LACR_1946 LLKF_1947 llmg_1957 ysdB sodium ABC transporter ATP-binding protein negative 0.053 0.106
L192240 LACR_0194 LLKF_0183 llmg_0200 feoA ferrous iron transport protein A positive 0.054 0.113
L148945 LACR_1868 LLKF_1872 llmg_0725 yrgF hypothetical protein negative 0.057 0.184
B
locustag IL1403 locustag SK11 locustag KF147 locustag MG1363 gene function correlation average P-value maximum P-value
L0223 LACR_0665 LLKF_0631 llmg_0614 ctsR class III stress genes transcriptional repressor negative 0.025 0.055
L128386 LACR_0373 LLKF_0384 llmg_0348 fhuG ferrichrome ABC transporter permease FhuG positive 0.030 0.051
L100027 LACR_2040 LLKF_2041 llmg_2036 ytbC hypothetical protein negative 0.039 0.127
L0046 LACR_0642 LLKF_0600 llmg_0586 gnd 6-phosphogluconate dehydrogenase negative 0.044 0.115
L127476 LACR_0372 LLKF_0383 llmg_0347 fhuB ferrichrome ABC transporter permease protein positive 0.059 0.109
L117074 LACR_2341 LLKF_2294 llmg_2327 yvdD glycerol uptake facilitator protein negative 0.066 0.134
L103246 LACR_1565 LLKF_1577 llmg_1026 ypaC methylase for ubiquinone/menaquinone biosynthesis negative 0.077 0.102
L104745 LACR_1567 LLKF_1579 llmg_1024 ypaE hypothetical protein negative 0.081 0.118
L162870 LACR_1609 LLKF_1641 llmg_0989 ypgD ABC transporter ATP binding and permease protein positive 0.098 0.183
L129403 LACR_0374 LLKF_0385 llmg_0349 fhuD ferrichrome ABC transporter substrate binding protein positive 0.099 0.157

Top 10 highest correlating transcript levels with robustness towards heat stress (A) or oxidative stress (B). Average P-value is the average of the P-values of the correlation as assessed by a linear model of the strains MG1363, IL1403, KF147 and SK11 and was used to rank the genes. Maximum P-value indicates the largest P-value of the correlation among the four strains.