Table 1. Selection pressures in five genes from bat- and dog-related RABVs.
Data set | Gene | dN/dS | SLACa | FELa | MEME-internala | FUBARb |
---|---|---|---|---|---|---|
Bat–related RABV (n = 67) | N | 0.045 | - | - | ND | - |
P | 0.139 | - | - | ND | - | |
M | 0.063 | - | - | ND | - | |
G | 0.133 | 496 | 175, 496 | ND | - | |
L | 0.044 | - | - | ND | - | |
Dog-related RABV (n = 254) | N | 0.032 | - | - | 436 | - |
P | 0.126 | - | - | 55, 154, 265 | - | |
M | 0.068 | - | - | - | - | |
G | 0.099 | 484 | 484 | 198, 476 | 484 | |
L | 0.038 | - | - | 430, 681, 2091 | - |
dN/dS ratios are calculated using SLAC
Putatively positively selected codons identified by more than one method are underlined
a Codons with p-value < 0.05
b Codons with posterior of probability > 0.95
ND: not done