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. 2016 Sep 17;31(4):369–377. doi: 10.1264/jsme2.ME16087

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Copyright © 2016 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions.

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 3 — Phylogenetic tree of partial pmoA and amoA nucleotide sequences retrieved from an analysis of A189f/A682r and A189f/mb661r clone libraries from 0.6-TCM soil. pmoA clones are grouped into eight groups (A–H) based on at least 90% nucleotide sequence identity. GenBank accession numbers are shown for sequences of cultured methanotrophs and clones from other studies. The bar indicates 10% sequence divergence. Bootstrap values are given and based on 500 data resampling. Boxes marked by dashed lines show the phylogenetic affiliations of the pmoA clones from 0.6-TCM soil.