TABLE 1.
Sequences of primers used in the ChIP assay
Primer positions are indicated relative to transcription start site.
| Name | Forward primer | Reverse primer | Primer positions |
|---|---|---|---|
| ICP0-P1 | TAGGGTCAGGGGGTTCCG | GGGGACCCCCACTCATACA | 169/294 |
| ICP0-P2 | GTTCCAGTGTAAGGGTCGGG | ATACGACCCCCATGGAGCC | −13/148 |
| ICP0-P3 | CCGACAGTCTGGTCGCATTT | GGCTCCATGGGGGTCGTAT | −158/7 |
| ICP0-P4 | CCATTGGGGGAATCGTCAC | CTTCTGTGGTGATGCGGAG | −227/−65 |
| ICP0-P5 | GGGCATGCTAATGGGGTTCT | GCAGTGACGATTCCCCCAAT | −380/−206 |
| ICP0-P6 | CAATGAACCCGCATTGGTCC | AGAACCCCATTAGCATGCCC | −493/−361 |
| ICP0-P7 | CTTAATGGGCAACCCCGGTA | CGCCTTCCCGAAGAAACTCA | −621/−432 |
| ICP0-P8 | CTTGTTCCGCTTCCCGGTAT | GAATACCGGGGTTGCCCATT | −707/−599 |
| TK-P1 | GGGCGATTGGTCGTAATCCA | CCCAACGGCGACCTGTATAA | 196/297 |
| TK-P2 | CCGGTATTGTCTCCTTCCGT | CTGCCGGGACGCCCT | 42/191 |
| TK-P3 | AAACGCGGGCGTATTGGT | ACAATACCGGAAGGAACCCG | −107/50 |
| TK-P4 | GCAGGTAGGTCTTCGGGATG | GGCATCTCTGCCCCTTCTTC | −568/−453 |
| TK-P5 | AAAAGCCTAGCAGGTCGGAG | CCTCTCTTCTGGCGCCTAAC | −1459/−1354 |
| TK-P6 | AGAAACTCGGCATACAGGGC | GAGATTCTGGAGCGCGAACA | −1739/−1600 |
| TK-P7 | AAGTGGTCCGGAAGCCAAAA | GAGCCTTCTGATAGCCTCGG | −1982/−1860 |
| ICP27-P1 | CCCACAGTGTGTGGTCGC | TCCGACAAACCATCGGCAG | 301/481 |
| ICP27-P2 | GACGAGGACATGGAAGACCC | CTGGTTGAGGATCGTTGGGG | 138/297 |
| ICP27-P3 | CCAGAGGCCATATCCGACAC | CTGTCCGATTCCAGGTCGTC | −51/115 |
| ICP27-P4 | CGTCCCGTTACCAAGACCAA | CGGCACAGACAAGGACCAAT | −376/−240 |
| ICP27-P5 | CCATCATCCTCTCGGGCATC | GCCCCAAGACAGGACAGTTT | −654/−473 |
| ICP27-P6 | TCACCTTCTTGTACCACCGC | AACACCAGGTGGTGATGGTC | −942/−784 |
| ICP27-P7 | GCCGATGTATGTTTGGCGTC | GCAGGCGGGTAATTTTCGTG | −1131/−1000 |
| ICP27-P8 | TCCGCTGCACCGATGTATTT | CCCGCGATAAGATTGGCGTA | −1460/−1290 |
| NEAT1 | TGTCCCTCGGCTATGTCAGA | GAGGGGACGTGTTTCCTGAG | −920/−769 |