Figure 2.

Estrogen-regulated CTCF binding correlates with estrogen-regulated gene transcripts and enhancer RNAs. Relative overlap of CTCF within (A) the total of transcripts (defined from UCSD genes) or (B) estrogen regulated transcripts (defined from GRO-seq (10)). The genomic regions were defined as: gene promoter (defined as ±5 kilobases from gene start), gene body (defined from +5 kilobases from gene start to gene end) and intergenic regions (defined from −5 kilobases from gene start to gene end).