Figure 4.

Annotated scaffolds and elements linked to Cr1. On the left is a tentative map of the Cr1 region of chromosome 11 showing the positions of identified markers. The gene order shown was derived from Harkins et al. (1998) (BC_432_1110 labeled cr1lB, Cr1, OPG_16_950 labeled cr1lA) and Jermstad et al. (2011) (Cr1, scarOPG_16_950, UMN_3258 labeled cr1lC). To the right are five scaffolds and 14 gene annotations that are linked to the Cr1 gene. The evidence of expression of PILA_lg017786 was a single transcript (red bar) assembled from a library constructed from a resistant tree (Supplementary Methods in File S1). Scaffold super6135 is physically linked to scaffold 370413 that harbors cr1lB by two fosmid DiTags.