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. Author manuscript; available in PMC: 2017 Feb 28.
Published in final edited form as: Nature. 2016 Aug 31;537(7621):567–571. doi: 10.1038/nature19352

Extended Data Table 3. Crystallographic data collection and refinement statistics.

Crystallographic data collection and refinement statistics for LBD structures.

DATA COLLECTION (2S,4R)-4-MethylGlu LY466195 - Glu
Space group P61 P6122
Unit cell a, b, c (Å) 52.3, 52.3, 170.9 102.8, 102.8, 282.0
a, β, g 90, 90, 120 90, 90, 120
Number per a.u. 1 2
Wavelength (Å) 1.0000 1.0000
Resolution (Å) a 30 – 1.27 (1.29) 30 – 1.8 (1.83)
Unique observations 68757 82330
Mean redundancy b 7.0 (4.7) 14.5 (14.2)
Completeness (%) b 99.4 (95.2) 100 (100)
Rmergebc 0.043 (0.335) 0.058 (> 1)
Rpimbd 0.017 (0.166) 0.017 (0.326)
I/s(I)b 45.6 (3.8) 48.4 (2.8)
REFINEMENT
Resolution (Å) 27.29 – 1.27 29.86 – 1.80
Protein atoms (AC) e 2127 (80) 4125 (95)
Ligand atoms 11 34
Li/Cl/SO4 ions -/-/- 2/10/2
Water atoms 410 533
Rwork/Rfree (%) f 14.3/16.3 16.4/18.7
rms deviations
Bond lengths (Å) 0.009 0.014
Bond angles ° 1.24 1.40
Mean B-Values (Å2)
Protein overall 20.9 27.5
MC/SC g 18.6/23.2 23.4/31.7
Ligand 13.2 19.8
Li/Cl/SO4 ions -/-/- 23.8/57.1/34.8
Water 34.9 34.1
Ramachandran % h 97.8/0 97.9/0

Superscripts a–h denote the following:

a

Values in parenthesis indicate the low resolution limit for the highest-resolution shell of data.

b

Values in parenthesis indicate statistics for the highest-resolution shell of data.

c

Rmerge = (Σ|II − <II>|)/ΣI |II|, where <II> is the mean II over symmetry–equivalent reflections.

d

Rpim=(1/(n-1)I=1nIIII)/III, where <II> is the mean II over symmetry–equivalent reflections.

e

Alternate conformations.

f

Rwork = (Σ ||Fo| − |Fc||)/Σ |Fo|, where Fo and Fc denote observed and calculated structure factors, respectively; 5% of the reflections were set aside for the calculation of the Rfree value.

g

Main chain/Side chain.

h

Preferred/Disallowed conformations.