Table 1. Statistics and assembled result of SOAP denovo2 and Trinity.
| Species | Assembly method | Total number of contigs | Total number of length | N50 | Max contig length |
|---|---|---|---|---|---|
| Quasipaa boulengeri | K50a | 6,341,679 | 1,860,878,175 | 300 | 2,615 |
| K55a | 6,086,855 | 1,875,157,178 | 314 | 2,880 | |
| K60a | 5,715,340 | 1,870,183,020 | 332 | 3,183 | |
| K65a | 5,460,129 | 1,843,817,246 | 338 | 2,817 | |
| K70a | 5,122,048 | 1,779,429,007 | 332 | 2,980 | |
| K75a | 4,926,588 | 1,723,696,265 | 318 | 2,779 | |
| K80a | 4,686,214 | 1,630,358,728 | 300 | 2,830 | |
| Trinity | 1,555,983 | 755,862,296 | 526 | 16,672 | |
| Amolops chunganensis | K50a | 5,072,290 | 1,417,075,271 | 300 | 2,537 |
| K55a | 4,955,300 | 1,436,818,547 | 300 | 2,741 | |
| K60a | 4,746,605 | 1,436,171,325 | 300 | 2,416 | |
| K65a | 4,549,311 | 1,407,207,578 | 300 | 2,513 | |
| K70a | 4,301,826 | 1,350,614,260 | 300 | 2,527 | |
| K75a | 4,167,451 | 1,308,301,284 | 300 | 2,578 | |
| K80a | 4,007,361 | 1,244,363,080 | 300 | 4,366 | |
| Trinity | 1,017,500 | 448,075,968 | 469 | 16,795 |
Notes.
The k-mer sizes used in SOAP denovo2.