TABLE 4.
Genotypes of 30 clinical isolates determined by using the diagnostic DNA microarray
| Strain or no. of isolates | Codon(s) (amino acid[s]) at amino acid positiona:
|
Phenotype | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67b | 81 | 82 | 83 | 84 | 85 | 87 | 89 | 91b | 100b | 102b | 106b | ||
| E. coli K-12 | GCC (Ala) | GGT (Gly) | GAC (Asp) | TCG (Ser) | GCG (Ala) | GTC (Val) | GAC (Asp) | ATC (Ile) | CGC (Arg) | TAT (Tyr) | CTG (Leu) | CAG (Gln) | |
| 1 | TCG (Ser) | GTT | GAC (Asp) | CGT | TAC | Sensitive | |||||||
| 3 | TTG (Leu) | GTC | AAC (Asn) | CGC | TAT | Resistant | |||||||
| 24 | TTG (Leu) | GTT | AAC (Asn) | CGT | TAC | Resistant | |||||||
| 1 | TTG (Leu) | GTT | TAC (Tyr) | CGT | TAC | Resistant | |||||||
| 1 | TCG (Ser) | GTT | GGC (Gly) | CGT | TAC | Resistant | |||||||
a
Boldface indicates missense mutations; underlining indicates silent mutations.
b
This position was outside the region covered by the capture probe and therefore was determined by DNA sequencing.