TABLE 1.
Nucleotide sequences of primers used for RT-PCR and/or sequencing in this study
| Primer | 5′-3′ nucleotide sequence | Usea | Reference or source |
|---|---|---|---|
| SZAHA+ | CTCGAGAGCAAAAGCAGGGG | P, S | 70 |
| SZAHA− | AGTAGAAACAAGGGTGTTTTT | P, S | 70 |
| H1HA1095Rb | AGGCATGATAGATGGGTGG | S | This study |
| H3HA1169R | AAGCACTCAAGCCGCCAT | S | This study |
| SZANA+ | AGCAAAAGCAGGAGTTTAAAATG | P, S | 70 |
| SZANA− | AGTAGAAACAAGGAGTTTTTT | P, S | 70 |
| N1NA408F | AGGGGCCTTGTTGAATGA | S | This study |
| N3NA522F | GATATGTATTGCTTGGTCT | S | This study |
| SZANP+ | CTCGAGAGCAAAAGCAGGGT | P, S | 70 |
| SZANP− | AGTAGAAACAAGGGTATTTTTC | P, S | 70 |
| NP484F | AGGATGTGTTCTCTGATGC | S | This study |
| SZAM+ | CTCGAGCAAAAGCAGGTAGAT | P, S | 70 |
| SZAM− | AGTAGAAACAAGGTAGTTTTTT | P, S | 70 |
| SZANS+ | AGCAAAAGCAGGGTGACAAA | P, S | 70 |
| SZANS− | AGTAGAAACAAGGGTGTTTTTT | P, S | 70 |
| SZAPB1+ | AGCAAAAGCAGGCAAACCAT | P, S | 70 |
| SZAPB1− | AGTAGAAACAAGGCATTTTTTCAT | P, S | 70 |
| PB1589F | AAGAAAATGGTCACACAA | S | This study |
| PB11548R | AGTTTTGGAGTGTCTGGA | S | This study |
| SZAPB2+ | CTCGAGCAAAAGCAGGTCAA | P, S | 70 |
| SZAPB2− | AGTAGAAACAAGGTCGTTTTTAAAC | P, S | 70 |
| PB2657F | AGTGGCTGGTGGAACAAG | S | This study |
| PB21750R | AGCCATTCCAGTCTCTGG | S | This study |
| SZAPA+ | CTCGAGCAAAAGCAGGTACTGAT | P, S | 70 |
| SZAPA− | AGTAGAAACAAGGTACTTTTTTGGAC | P, S | 70 |
| PA691F | GCCTATGTGGATGGATTC | S | This study |
| PA1467R | CCAATGATAAGCAAATGT | S | This study |
a
P, PCR; S, sequencing.
b
R, reverse primer; F, forward primer.