TABLE 1.
Nucleotide sequences of the oligonucleotides used for PCR amplification and DNA sequencing
Procedure and gene | Primer | Expected size of PCR amplicon (bp) | Reference |
---|---|---|---|
Amplification | |||
blaTEM-1 | 5′-CCG TGT CGC CCT TAT TCC-3′ | 824 | 50 |
5′-AGG CAC CTA TCT CAG CGA-3′ | |||
blaSHV-1 | 5′-ATT TGT CGC TTC TTT ACT CGC-3′ | 1,051 | 42 |
5′-TTT ATG GCG TTA CCT TTG ACC-3′ | |||
blaCTX-M-1 | 5′-CGG TGC TGA AGA AAA GTG-3′ | 354 | 3 |
5′-TAC CCA GCG TCA GAT TAC-3′ | |||
blaCTX-M-2 | 5′-ACG CTA CCC CTG CTA TTT-3′ | 780 | 24 |
5′-GCT TTC CGC CTT CTG CTC-3′ | |||
blaCTX-M-9 | 5′-GCA GAT AAT ACG CAG GTG-3′ | 393 | 32 |
5′-CGG CGT GGT GGT GTC TCT-3′ | |||
blaAmpC | 5′-ACT TAC TTC AAC TCG CGA CG-3′ | 663 | 7 |
5′-TAA ACA CCA CAT ATG TTC CG-3′ | |||
Sequencing, blaCTX-M-2 | 5′-TTA ATG ATG ACT CAG AGC ATT C-3′ | 902 | 43 |
5′-GAT ACC TCG CTC CAT TTA TTG-3′ |