TABLE 1.
Representative MERS-CoV strains isolated in the 2012-2015 outbreaks and their mutations in MERS-CoV RBD containing residues 377 to 588a
GenBank protein ID | Yr isolated | Host | Region | Mutation in MERS-CoV RBD residue: |
No. of mutations | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
400 | 424 | 431 | 434 | 457 | 460 | 482 | 506 | 509 | 510 | 520 | 522 | 529 | 530 | 534 | 582 | |||||
AFS88936.1 | 2012 | Human | EMC | K | T | A | A | S | S | A | L | D | D | A | Q | I | V | V | N | 0 |
AFY13307.1 | 2012 | Human | England | F | 1 | |||||||||||||||
AGG22542.1 | 2012 | Human | England | F | 1 | |||||||||||||||
AGV08379.1 | 2012 | Human | KSA | G | 1 | |||||||||||||||
AGV08584.1 | 2012 | Human | KSA | A | 1 | |||||||||||||||
AHI48528.1 | 2013 | Human | KSA | P | V | 2 | ||||||||||||||
AHI48733.1 | 2013 | Human | KSA | V | 1 | |||||||||||||||
AHC74088.1 | 2013 | Human | Qatar | F | 1 | |||||||||||||||
AGV08438.1 | 2013 | Human | KSA | I | 1 | |||||||||||||||
AID55090.1 | 2014 | Human | KSA | I | 1 | |||||||||||||||
AID55095.1 | 2014 | Human | KSA | I | 1 | |||||||||||||||
AID55087.1 | 2014 | Human | KSA | H | 1 | |||||||||||||||
AKL59401.1 | 2015 | Human | Korea | L | 1 | |||||||||||||||
ALB08322.1 | 2015 | Human | Korea | G | 1 | |||||||||||||||
ALB08289.1 | 2015 | Human | Korea | T | 1 | |||||||||||||||
AHY22545.1 | 2013 | Camel | KSA | N | 1 | |||||||||||||||
AHL18090.1 | 2013 | Camel | Egypt | S | 1 | |||||||||||||||
AHX00711.1 | 2013 | Camel | KSA | G | 1 | |||||||||||||||
AHX00721.1 | 2013 | Camel | KSA | G | 1 | |||||||||||||||
AHY22555.1 | 2013 | Camel | KSA | S | 1 |
EMC, Erasmus Medical Center; KSA, Saudi Arabia. Key residues in the RBM of the RBD are in bold.