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. 2004 Oct;186(19):6465–6476. doi: 10.1128/JB.186.19.6465-6476.2004

TABLE 2.

Primers used in this study

Primer Sequence
Degenerate primers
    N terminal 5′ GCNCCNACNCARGGNGAYGGNACN 3′
    C terminal 5′ NARRTARTTNARNGTRAARTTNGC 3′
Adapter sequence 5′ GATCCTAATACCACTCACATAGGGCGGCCGCCCGGGC 3′, 3′ GATTATGGTGAGTGTATCCCGCCGGCGGGCCCG 5′
WP1 5′ GATCCTAATACCACTCACATAGGGCGGCCGCCCGGGC 3′
Biotinylated primer (BP1) 5′ GTGTTCAGGTTTTGATTCACCACCATC 3′
IP2 5′ GTTCTTGATTGAACAGGCTGC 3′
Primers for amplifying 537-bp fragment
    Forward primer 5′ GGATCCATGAAACTTAACACAATTGGC 3′
    Reverse primer 5′ AAGCTTAAGGTAGTTGAGAGTGAAGTTG 3′
Primers for point mutations
    Val32Ala (forward) 5′ CTCAAGGTGACGGCGCAGCAAAATTCACCGGTTCTATTATTAATG 3′
    Phe34Ala (forward) 5′ GGTGACGGCGCAGTTAAAGCAACCGGTTCTATTATTAATGC 3′
    Ile38Ala (forward) 5′ GCAGTTAAATTCACCGGTTCTGCAATTAATGCAGCCTGTTCAATC 3′
    Triple mutation (forward) 5′ CTCAAGGTGACGGCGCGCAAAGCAACCGGTTCGCAATTAATGCAGCCTGTTCAAT
        (Val-Phe-Ile→Ala-Ala-Ala)     CAAG 3′