TABLE 2.
Primer sequences used in this study
| Primera | Sequence (5′ to 3′) |
|---|---|
| 1182-UP-A | GAATTCATCTTTGCCTGTCATC |
| 1183-UP-B | GGATCCCTAAGAATTTACGT |
| 1183-DN-A | GGATCCCCTATTTATAAATCTGAC |
| 1183-DN-B | AAGCTTCAACGTATTGCCAT |
| 1182-F | ATCTTACGTAAATTCTTAG |
| 1183-R | GTCAGATTTATAAATAGG |
| 0366-UP-A | GAATTCCGCTAGATTATGC |
| 0366-UP-B | GGATCCTTTTAATTGGGCAGGAAG |
| 0366-DN-A | GGATCCAAATCAAGTATTGGAC |
| 0366-DN-B | AAGCTTTGTAAGTGATGCGC |
| 0366-R | TTCGGCGAATTAAGTGCTAATTC |
| 0364CloneF | AAAGTCACTGTAGAACAGCCTGC |
| 0364CloneR | AATAGTTGGCTGAAAAGCTGAC |
| 0938CloneF | GATTAAATTCAGCACCTAAACAAGG |
| 0938CloneR | AAAGTGCGGTCGAAAATAGG |
| 0365-6F | CGCAAAAGAAGGACACAAAG |
| 0365-6R | CGGGATCCAATACTTGATTTGGC |
| QPCR-tfoX-F | GCTTTTGGCGAGGATTGGAT |
| QPCR-tfoX-R | TCAGCTAAAGCAACCGAAACC |
| QPCR-rec2-F | ACGCTTATCGCCACAGCAA |
| QPCR-rec2-R | AGGCACCTCTTTCGCTTTCC |
| QPCR-comA-F | GCACTTTACAAATCGGCATTCA |
| QPCR-comA-R | TGTGGCTGTTCGAGATCATCA |
| QPCR-0364-F2 | TCGAATTAAAGGCACTGGAACA |
| QPCR-0364-R2 | GGGCGGCATAGTTATCAGAATG |
| QPCR-H10365 | GGATTTAACGCGCCAACAA |
| QPCR-0366-F2 | GCGGTTATTTTCCCTTTCATTTT |
| QPCR-0366-R2 | GTTCCACACGCGCTTTAGC |
| QPCR-0368-F | CGTGCCGTTGTTGATTGTG |
| QPCR-0368-R | GGTTCGCCATATTTTTCTTGCA |
| QPCR-0937-F3 | GGATTATTGATCCGCTAGATGGTACT |
| QPCR-0937-R3 | CCCGACTTCAGTGCGATTTT |
| QPCR-0938-F | TTTGCAGTACCATTATGGAAAACC |
| QPCR-0938-R | TCTGCCCGAGCCTGAATTT |
| QPCR-0939-F | ACAAACGCAAAATCAACACATGT |
| QPCR-0939-R | GAAATCCTAATCGGCGAAGATCT |
| QPCR-0942-F | AAATTTCCTATGCCAGCCAGTTT |
| QPCR-0942-R | AAACGCCACATCATTGAATCTTT |
| QPCR-1181-F | GGCATTATTAATTTCGAATAGCTTCA |
| QPCR-1181-R | CGTTAATTCTTCTGCAAAATGCA |
| QPCR-1182-F | GGGTTGGGTAATGTCTGAAAAGTT |
| QPCR-1182-R | AATAAGCTGGCGGCGATAAA |
a
All custom primers used in this study were manufactured by QIAGEN (Operon), Valencia, Calif.