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. 2016 Oct 26;11:9–17. doi: 10.1016/j.atg.2016.10.002

Table 3.

Simulated segregation probabilities and diversity for founders selected from a source population segregating for a bi-allelic locus with varying minor allele frequencies (0.01, 0.1, 0.2, 0.4 and 0.5). The simulated lines are sampled from a population in Hardy-Weinberg equilibrium.

p(segregating)
Diversity
MPP type 0.01 0.1 0.25 0.4 0.5 0.01 0.1 0.25 0.4 0.5
2-way 0.020 0.180 0.375 0.480 0.500 0.010 0.090 0.188 0.240 0.250
4-way 0.039 0.344 0.680 0.845 0.875 0.015 0.135 0.281 0.360 0.375
8-way 0.077 0.570 0.900 0.983 0.992 0.017 0.158 0.328 0.420 0.438
16-way 0.149 0.815 0.990 1.000 1.000 0.019 0.169 0.352 0.450 0.469
26-way 0.230 0.935 0.999 1.000 1.000 0.019 0.173 0.361 0.462 0.481
NAM 0.230 0.935 0.999 1.000 1.000 0.015 0.135 0.281 0.360 0.375
Source 1.000 1.000 1.000 1.000 1.000 0.020 0.180 0.375 0.480 0.500