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. 2016 Dec 19;9:41. doi: 10.1186/s13040-016-0118-0

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© The Author(s). 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Example dependency parse tree with indirect connection between two related keywords. The dependency parse tree for the sample sentence “GerE binds to a site on one of these promoters, cotX, that overlaps its −35 region.” The related interaction keywords “binds” and “promoters” are not directly connected to each other with a dependency relation