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. 2016 Dec 20;7:1904. doi: 10.3389/fpls.2016.01904

Table 2.

List of primers used for in vitro cleavage assay and targeted deep sequencing.

Target Sequence (5′-3′)
MLO-7 in vitro cleavage assay F; GCAGTGGTTAAAAGGCAGAC
R; CTTGGTTCTTCCCAAAGCC
MLO-7 deep sequencing F; CCAAAGGTCTAACCCTTTTC
R; GGGAAACACCTTTTTCAGTC
DIPM-1 in vitro cleavage assay For RG1 – RG6
F; TTTTAATCTTCAACGTCTCC
R; TTGCCTGAAAATAAGCCCTC
For RG7 and RG8
F; TAGTAACCAAAGGGAAGTGG
R; TTCAACACTTGCCACATTGC
DIPM-1 deep sequencing F; GTCTTATGCCTCTTTGCGG
R; CTCCAGACTGTATAGCTGAG
DIPM-2 in vitro cleavage assay For RG1
F; TGCACAAATAACCGAGTCTC
R; ACTATGATGGCGATTAGAGC
For RG2 to RG5
F; CAAGGGTACATCAAACGACC
R; AAATTTACCGTGGAGAACCC
For RG6
F; ACATCCTCTTAGACAAGACC
R; AGCACAAACGAAAACGAGAG
DIPM-2 deep sequencing F; CGCTGCTCCTGTACTGCTAC
R; GTCGAGCACCGCCTTGTA
DIPM-4 in vitro cleavage assay For RG1
F; AGAAAAACAAGCCTTTCGCG
R; TCCGTACAATTCGTTGTTGG
For RG2 to RG6
F; CACCAACAACGAATTGTACGG
R; AGTAATAAGCACTCAGCCTC
For RG7
F; TGCAGTTTGAGTCTAATGCG
R; CCTCAATGTTCTTGTACCTC
DIPM-4 deep sequencing F; GATGTAATTAAGGGAATCGG
R; CAATCTTGCAATGGCGTGAA