Table 1. Genetic diversity indices of Sogatella furcifera populations in the Greater Mekong Subregion (GMS).
| Population code* (Number of individuals tested) | S | η | H | D (p) | Fs (p) | Hd (SD) | π (SD) | K | π (JC) |
|---|---|---|---|---|---|---|---|---|---|
| JP (25) | 6 | 6 | 7 | −1.38476 (0.07100) | −3.67776 (0.00000) | 0.617 (0.098) | 0.00145 (0.00031) | 0.853 | 0.00145 |
| KY (25) | 7 | 7 | 7 | −1.59097 (0.03500) | −3.47179 (0.00200) | 0.617 (0.098) | 0.00153 (0.00036) | 0.900 | 0.00153 |
| YS (24) | 3 | 3 | 4 | −0.37127 (0.35600) | −0.69024 (0.25300) | 0.598 (0.057) | 0.00116 (0.00019) | 0.685 | 0.00116 |
| FN (23) | 3 | 3 | 4 | −1.01220 (0.19300) | −1.48134 (0.04600) | 0.447 (0.118) | 0.00083 (0.00025) | 0.490 | 0.00083 |
| MD (25) | 3 | 3 | 4 | −1.50407 (0.05600) | −2.44153 (0.00100) | 0.297 (0.115) | 0.00053 (0.00022) | 0.313 | 0.00053 |
| BS (23) | 5 | 5 | 5 | −1.22178 (0.10300) | −1.54985 (0.08300) | 0.609 (0.082) | 0.00134 (0.00031) | 0.791 | 0.00134 |
| MS (19) | 5 | 5 | 6 | −1.43184 (0.05400) | −3.17970 (0.00200) | 0.643 (0.108) | 0.00131 (0.00030) | 0.772 | 0.00131 |
| YIJ (21) | 5 | 5 | 5 | −1.79547 (0.01700) | −2.59252 (0.00500) | 0.424 (0.131) | 0.00095 (0.00036) | 0.562 | 0.00096 |
| LC (23) | 1 | 1 | 2 | 0.18585 (0.75800) | 0.61246 (0.46500) | 0.300 (0.105) | 0.00051 (0.00018) | 0.300 | 0.00051 |
| NE (23) | 1 | 1 | 2 | 0.53502 (0.83700) | 0.87901 (0.52200) | 0.356 (0.100) | 0.00060 (0.00017) | 0.356 | 0.00060 |
| MH (25) | 4 | 4 | 4 | −0.76354 (0.25800) | −0.41635 (0.32600) | 0.597 (0.054) | 0.00129 (0.00027) | 0.760 | 0.00129 |
| SJ (24) | 5 | 5 | 6 | −1.24330 (0.11600) | −2.81348 (0.01200) | 0.616 (0.091) | 0.00130 (0.00027) | 0.764 | 0.00130 |
| GM (23) | 5 | 5 | 6 | −1.41008 (0.08700) | −3.15734 (0.00300) | 0.601 (0.101) | 0.00119 (0.00026) | 0.704 | 0.00120 |
| CY (25) | 1 | 1 | 2 | 0.72124 (0.84900) | 1.03183 (0.53000) | 0.380 (0.091) | 0.00065 (0.00016) | 0.380 | 0.00065 |
| CX (23) | 4 | 4 | 5 | −0.89102 (0.23000) | −1.74242 (0.08000) | 0.581 (0.093) | 0.00125 (0.00027) | 0.735 | 0.00125 |
| SM (24) | 5 | 5 | 6 | −1.54913 (0.03900) | −3.50173 (0.00300) | 0.543 (0.111) | 0.00106 (0.00027) | 0.623 | 0.00106 |
| XP (23) | 3 | 3 | 5 | −1.01220 (0.15600) | −2.86701 (0.00200) | 0.391 (0.125) | 0.00083 (0.00030) | 0.490 | 0.00083 |
| YUJ (23) | 5 | 5 | 6 | −1.82093 (0.01600) | −4.26158 (0.00000) | 0.458 (0.126) | 0.00087 (0.00028) | 0.514 | 0.00087 |
| ZY (23) | 3 | 3 | 4 | −0.73946 (0.25800) | −1.11359 (0.10300) | 0.486 (0.105) | 0.00098 (0.00026) | 0.577 | 0.00098 |
| SZ (24) | 8 | 8 | 8 | −1.55882 (0.03700) | −4.07697 (0.00100) | 0.725 (0.073) | 0.00187 (0.00036) | 1.101 | 0.00187 |
| L1 (25) | 2 | 2 | 3 | −0.12151 (0.43300) | −0.05780 (0.36500) | 0.440 (0.095) | 0.00085 (0.00021) | 0.500 | 0.00085 |
| L2 (24) | 4 | 4 | 4 | −0.71822 (0.25800) | −0.36644 (0.34400) | 0.591 (0.081) | 0.00134 (0.00033) | 0.790 | 0.00134 |
| L3 (21) | 3 | 3 | 3 | −1.45676 (0.07700) | −0.72758 (0.22200) | 0.267 (0.120) | 0.00063 (0.00033) | 0.371 | 0.00063 |
| L4 (19) | 1 | 1 | 2 | 0.41712 (0.76900) | 0.75823 (0.47800) | 0.351 (0.111) | 0.00060 (0.00019) | 0.351 | 0.00060 |
| L5 (17) | 2 | 2 | 3 | −1.06916 (0.19800) | −1.03838 (0.05600) | 0.324 (0.136) | 0.00057 (0.00026) | 0.338 | 0.00057 |
| L6 (22) | 5 | 5 | 6 | −1.28369 (0.09300) | −2.89198 (0.00700) | 0.580 (0.111) | 0.00132 (0.00033) | 0.779 | 0.00133 |
| L7 (22) | 1 | 1 | 2 | −0.64112 (0.24200) | −0.17575 (0.18500) | 0.173 (0.101) | 0.00029 (0.00017) | 0.173 | 0.00029 |
| L8 (19) | 2 | 2 | 3 | 0.10134 (0.62600) | 0.08500 (0.45200) | 0.556 (0.073) | 0.00101 (0.00018) | 0.596 | 0.00101 |
| C1 (24) | 3 | 3 | 3 | −0.76831 (0.21000) | 0.12791 (0.44100) | 0.409 (0.103) | 0.00095 (0.00034) | 0.558 | 0.00095 |
| C2 (17) | 2 | 2 | 3 | 0.04791 (0.61500) | 0.01788 (0.39000) | 0.559 (0.083) | 0.00102 (0.00020) | 0.603 | 0.00102 |
| C3 (16) | 4 | 4 | 4 | −0.77113 (0.24700) | −0.47280 (0.34100) | 0.642 (0.081) | 0.00154 (0.00040) | 0.908 | 0.00155 |
| C4 (23) | 2 | 2 | 3 | −0.40840 (0.33600) | −0.34481 (0.27400) | 0.423 (0.104) | 0.00075 (0.00020) | 0.443 | 0.00075 |
| V1 (22) | 2 | 3 | 4 | −0.54947 (0.33300) | −1.89698 (0.03100) | 0.398 (0.122) | 0,.00071 (0.00023) | 0.416 | 0.00071 |
| V2 (16) | 4 | 4 | 5 | −1.54972 (0.04200) | −2.75106 (0.00100) | 0.533 (0.142) | 0.00103 (0.00033) | 0.608 | 0.00103 |
| V3 (23) | 4 | 4 | 5 | −1.07287 (0.18000) | −2.01641 (0.05100) | 0.545 (0.104) | 0.00113 (0.00028) | 0.664 | 0.00113 |
| V4 (21) | 2 | 2 | 3 | −0.84329 (0.22400) | −0.82277 (0.18700) | 0.267 (0.120) | 0.00060 (0.00029) | 0.352 | 0.00060 |
| M1(18) | 8 | 8 | 8 | −1.38547(0.07300) | −3.87433(0.00200) | 0.830 (0.064) | 0.00237 (0.00042) | 1.399 | 0.00238 |
| M2(12) | 1 | 1 | 2 | 0.54055(0.80900) | 0.73482(0.47900) | 0.409 (0.133) | 0.00069 (0.00023) | 0.409 | 0.00070 |
*The indices of the T1, T2, M3, and M4 were not calculated because the number of individuals was below 10; S, number of polymorphic (segregating) sites; η, total number of mutations; H, number of haplotypes; Hd, haplotype diversity; π, nucleotide diversity; K, average number of nucleotide differences; π(JC), nucleotide diversity with Jukes and Cantor correction; D, Tajima’s D statistic; Fs, Fu ‘s F test statistic; p, Significance values of the parameters were evaluated using 10000 simulations.