Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2016 Dec 16;7:13783. doi: 10.1038/ncomms13783

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

Copyright © 2016, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

PMC Copyright notice

(a) Transcription of the LacI/GalR gene cphy2742 is up-regulated on galacturonic acid relative to other carbon sources. Bars shows average RNA-seq RPKM of duplicate cultures; error bars are one s.d. (b–d) Upstream palindromes resembling cre operator sites found upstream of C. phytofermentans LacI/GalR genes and their orthologs from related genomes (b) cphy2742 (motif e=1.1 × 10⁻⁸), (c) cphy2467 (motif e=2.4 × 10⁻⁸) and (d) cphy1883 (motif e=8.9 × 10⁻²). (e) Twelve genes have both TSS (blue triangles) and putative Cphy2742 operators (red ovals) including genes for pectin lyases (green), galacturonic acid metabolism (purple), general carbon metabolism (yellow) and other or unknown (grey). The distance from the translation start is shown for each site.