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. 2016 Nov 28;1(1):26–42. doi: 10.1016/S1672-0229(03)01005-2

Fig. 4.

Fig. 4.

To check out chimerics, we aligned both raw data (ESTs) and contig consensi to rice genome. This figure shows the putative intron length distribution by aligning ESTs and contig consensi with rice indica genomic scaffolds using BLASTN (E-value 1E-15). HSPs with identity length greater than 70% of the contigs/ESTs were chosen. The gaps between two HSPs were putative introns. We found that 524 contigs have introns longer than 2 kb but shorter than 5 kb, and 237 contigs have introns longer than 5 kb.