Table 5.
Genes Mostly Differentially Expressed in PA64s between Short Sunlight (Fertile, Lib 6 and 7) and Long Sunlight (Sterile, Lib 4 and 8)
| MasterContig Name | BLASTN Annotation | BLASTX Annotation | Change Folds | Chi-square Test |
|---|---|---|---|---|
| Contig8033 Contig13583 Contig13282 Contig12566 Contig10517 Contig11574 Contig13743 Contig12532 Contig1611 |
Oryza sativa mRNA for novel protein, osr40c1 | Unknown | 10.52 | 5.93E-23 |
| Contig13748 | Unknown | Unknown | 5.76 | 2.27E-09 |
| Contig13702 Contig972 Contig716 Contig12348 Contig12780 |
Oryza sativa APXb mRNA for L-ascorbate peroxidase, complete cds | (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) | 6.46 | 4.67E-09 |
| Contig13724 Contig964 Contig13691 rsicek_1248.y1.abd |
Oryza sativa mRNA for sucrose synthase | (P30298) Sucrose synthase 1 (EC 2.4.1.13) | 0.24 | 5.11E-09 |
| Contig13413 Contig13912 | Oryza sativa GF14-C protein mRNA, complete cds | (Q9SP07) 14-3-3-like protein | 4.47 | 1.13E-08 |
| Contig13637 Contig13705 Contig13584 Contig12438 |
Zea mays plasma membrane integral protein ZmPIP2-l mRNA, complete cds | (P42767) Aquaporin | 3.01 | 2.04E-08 |
| Contig5735 Contig13762 Contig13678 rsicef_9381.y1.abd Contig13184 Contig944 Contig10283 rsicee_1225.y1.abd rsiced_2665.y1.abd rsiceh_22549.y1.abd rsicef_12473.y1.abd rsiceh_20108.y1.abd |
Oryza sativa mRNA for aquaporin, complete cds | (Q08733) Plasma membrane intrinsic protein 1C | 2.61 | 5.32E-08 |
| Contig13617 | Unknown | (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor | 0.10 | 4.93E-07 |
| Contig11991 Contig13740 Contig917 Contig9907 Contig13488 Contig12338 Contig12990 Contig8794 |
Zea mays methionine synthase mRNA, partial cds | (Q42699) 5-methyltetrahydropteroyl-triglutamate—homocystein | 0.32 | 1.04E-06 |
| Contig13681 rsiceg_11955.y1.abd Contig3125 |
Oryza sativa mRNA for ribosomal protein S4 | (O22424) 40S ribosomal protein S4 | 5.63 | 3.33E-06 |
| Contig8371 Contig12088 Contig13877 rsicen_21644.y1.abd Contig10603 Contig13875 Contig3069 rsiceh_8473.y1.abd rsicek_11431.y1.abd siceh_0191.z1.abd Contig12354 Contig13930 Contig13919 Contig47 rsicef_6881.y1.abd sicef_0294.z1.abd rsicef_6584.y1.abd |
Oryza sativa mRNA for EF-1 alpha, complete cds | (O64937) Elongation factor 1-alpha (EF-1-alpha) | 0.63 | 5.76E-06 |
| Contig13741 Contig12901 Contig13527 Contig430 rsicef_2367.y1.abd |
Oryza sativa mRNA for gamma-Tip, complete cds | (P50156) Tonoplast intrinsic protein, gamma (Gamma TIP) | 3.16 | 6.89E-06 |
| Contig13766 Contig12761 Contig12457 Contig13394 Contig12389 Contig6925 |
Oryza sativa gene for heat shock protein 82 HSP82 | (P33126) Heat shock protein 82 | 0.47 | 7.7E-06 |
| Contig13917 | Oryza sativa high mobility group protein (HMG) mRNA, complete cds | Unknown | 4.83 | 9.8E-06 |