Table 3. Number of most abundant genes in the subtelomeres in the genomes of Salvador-I, PvP01, PvT01 and PvC01.
Description | Sal-I a | PvP01 b | PvC01 | PvT01 | |
---|---|---|---|---|---|
Multigene family | PIR protein c | 346 | 1212 | 1061 | 867 |
tryptophan-rich protein d | 34 | 40 | 40 | 40 | |
lysophospholipase e | 11 | 10 | 9 | 8 | |
STP1 protein f | 9 | 10 | 11 | 3 | |
early transcribed membrane protein (ETRAMP) | 10 | 9 | 9 | 9 | |
Plasmodium exported protein (PHIST), unknown function g | 64 | 84 | 22 | 23 | |
reticulocyte binding protein (RBP) | 9 h | 9 h | 9 | 8 | |
Other genes | Plasmodium exported proteins of unknown function i | 23 | 447 | 266 | 261 |
Total | n/a | 497 | 1812 | 1427 | 1219 |
Numbers include pseudogenes and partial genes
a Published reference sequence 14
b Genome version 1.09.2016
c Other names include VIR protein and Pv-fam-c protein
d Other names include Pv-fam-a, trag and tryptophan-rich antigen
e Other names include PST-A protein
f Other names include PvSTP1
g Other names include Phist protein (Pf-fam-b) and RAD protein (Pv-fam-e)
h Includes RBP2e (PVP01_0700500) that was not present in the Salvador-I assembly. RBP1b (PVP01_0701100) is complete in PvP01. In Salvador-I RBP1b consists of two partial genes (PVX_098582, PVX_125738)
i Other names include Pv-fam-d protein and Pv-fam-c protein