Table 2.
The Proportion and Numbers of 6 Types of SNPs
| Type | gSNPs | iSNPs | cSNPs | P0-SNPs | P1-SNPs | P2-SNPs | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A/C | 10.74% | (387,971) | 12.12% | (29,426) | 8.94% | (4,064) | 10.41% | (1,258) | 10.13% | (1,037) | 7.64% | (1,769) |
| A/G | 28.60% | (1,032,704) | 25.31% | (61,451) | 32.46% | (1,475) | 41.44% | (5,007) | 30.40% | (3,111) | 28.69% | (6,640) |
| A/T | 13.22% | (477,294) | 16.42% | (39,870) | 6.02% | (2,737) | 6.08% | (735) | 7.78% | (796) | 5.21% | (1,206) |
| C/G | 8.08% | (291,724) | 8.71% | (21,145) | 10.60% | (4,821) | 10.23% | (1,236) | 9.82% | (1,005) | 11.15% | (2,580) |
| C/T | 28.63% | (1,033,686) | 25.34% | (61,517) | 32.53% | (14,787) | 20.66% | (2,497) | 34.28% | (3,509) | 37.94% | (8,781) |
| G/T | 10.73% | (387,628) | 12.11% | (29,402) | 9.45% | (4,295) | 11.18% | (1,351) | 7.59% | (777) | 9.36% | (2,167) |
| Total | 100% | (3,611,007) | 100% | (242,631) | 100% | (45,462) | 100% | (12,084) | 100% | (10,235) | 100% | (23,143) |