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. 2016 Sep 7;8(10):3120–3139. doi: 10.1093/gbe/evw221

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© The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 3.— — Results of the one-factor analysis showing sex-biased genes in each clone separately. (A) Dot plot showing the ratio of male/female expression for the J2 clone and the M10 clone, highlighting those genes that show differences in sex bias in the one-factor analysis compared with the two-factor (combined) analysis. Genes identified as sex-biased in the two-factor analysis or in the one-factor analysis for both clones are depicted in gray. Genes detected as sex-biased only in the J2 clone are shown in orange, whereas those detected as sex-biased only in the M10 clone are shown in yellow. Green dots indicate genes that are significantly female-biased in one clone, but significantly male-biased in the other. (B) Dot plot showing the ratio of M10/J2 expression for females and males. Genes identified as clone-biased in the two-factor analysis or in the one-factor analysis in both sexes are depicted in gray. Genes detected as clone-biased only in females are shown in orange, whereas those detected as clone-biased only in males are shown in yellow. Green dots indicate genes that are significantly M10-biased in one sex, but significantly J2-biased in the other. (C) Proportional Venn diagram for female-biased genes in the two-factor analysis and in each of the clones in the one-factor analysis. (D) Proportional Venn diagram for male-biased genes in the two-factor analysis and in each of the clones in the one-factor analysis.