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. 2016 Dec 21;6:39637. doi: 10.1038/srep39637

Table 2. Details of docked complex of LasR receptor protein with natural ligand and compound cyclo(Trp-Ser).

Molecules Binding Energy (kcal/mol) Hydrogen bonding interactions Key Hydrophobic interactions
Natural ligind (3-oxo-C12HSL) −9.38 Trp60, Ser129, Tyr56, Asp73 Phe101, Leu110, Ala105, Trp88, Tyr93, Gly126, Ala50, Tyr47, Tyr64, Thr75
Cyclo(Trp-Ser) −8.40 Arg61, Tyr47, Ser129 Leu40, Gly38, Ala127, Ile52, Gly126, Ala50, Leu36, Tyr64