Table 1. Best linear unbiased predictions of additive genetic merit for Residual Feed Intake (RFI); raw phenotypes for RFI, dry matter intake (DMI) and average daily gain (ADG); number of reads passing filtering and concordant pair alignment rate for each animal within the Low (LRFI, more efficient) or High (HRFI, less efficient) groups.
Animal_ID | Sample accession* | BLUP RFI (kg/day) | RFI (kg/day) | DMI (kg/day) | ADG (kg/day) | Reads passing filtering | Concordant pair alignment rate (%) |
---|---|---|---|---|---|---|---|
HRFI0 | ERS1342435 | 0.125 | 1.808 | 10.53 | 1.39 | 20,238,310 | 92.10 |
HRFI1 | ERS1342436 | 0.109 | 1.182 | 8.95 | 1.63 | 20,711,295 | 92.10 |
HRFI2 | ERS1342437 | 0.094 | 0.659 | 10.07 | 1.54 | 17,055,887 | 91.90 |
HRFI3 | ERS1342438 | 0.092 | 0.597 | 10.17 | 1.85 | 19,285,529 | 92.00 |
HRFI4 | ERS1342439 | 0.090 | 0.496 | 8.54 | 1.54 | 18,410,456 | 92.10 |
HRFI5 | ERS1342440 | 0.088 | 0.411 | 9.72 | 1.86 | 22,050,730 | 84.00 |
HRFI6 | ERS1342441 | 0.087 | 0.421 | 10.32 | 1.92 | 19,119,265 | 91.60 |
HRFI7 | ERS1342442 | 0.086 | 1.280 | 9.09 | 1.53 | 16,497,720 | 91.40 |
HRFI8 | ERS1342443 | 0.086 | 0.327 | 8.97 | 1.66 | 14,395,852 | 91.60 |
HRFI9 | ERS1342444 | 0.072 | −0.155 | 9.78 | 1.78 | 19,750,013 | 92.40 |
mean | 0.093 | 0.703 | 10.17 | 1.67 | 18,751,506 | 91.12 | |
LRFI0 | ERS1342445 | −0.0990 | −1.228 | 8.49 | 1.73 | 18,979,482 | 91.50 |
LRFI1 | ERS1342446 | −0.0914 | −1.049 | 7.75 | 1.7 | 23,333,953 | 91.20 |
LRFI2 | ERS1342447 | −0.0862 | −0.7682 | 8.57 | 1.75 | 16,798,528 | 90.00 |
LRFI3 | ERS1342448 | −0.0699 | −0.5469 | 8.75 | 1.41 | 15,877,578 | 93.30 |
LRFI4 | ERS1342449 | −0.0341 | −0.3803 | 8.38 | 1.39 | 22,993,080 | 80.50 |
LRFI5 | ERS1342450 | −0.0417 | −0.1459 | 10.1 | 1.83 | 16,338,238 | 91.70 |
LRFI6 | ERS1342451 | −0.0414 | −0.6588 | 7.43 | 0.98 | 16,332,732 | 91.70 |
LRFI7 | ERS1342452 | −0.0360 | −0.5714 | 8.45 | 1.48 | 17,398,472 | 92.50 |
LRFI8 | ERS1342453 | −0.0679 | −1.198 | 8.4 | 1.78 | 16,164,645 | 91.40 |
LRFI9 | ERS1342454 | −0.0306 | −0.2845 | 10.41 | 2.33 | 15,321,005 | 91.40 |
mean | −0.0598 | −0.6832 | 8.67 | 1.63 | 17,953,771 | 90.52 |
*Sample accession in the ENA repository (EMBL-EBI), under study accession PRJEB15314.