Table 2. Average genome wide FST and average heterozygosity for B populations and simulations with selection and migration.
| Populations/Selection Scenario | Migration Rate | Mean Het | Variance Het | Mean FST | Variance FST |
|---|---|---|---|---|---|
| B populations | NA | 0.28 | 0.0024 | 0.08 | 0.0004 |
| NA | 0.29 | 0.0021 | |||
| NA | 0.28 | 0.0024 | |||
| NA | 0.27 | 0.0037 | |||
| NA | 0.27 | 0.0037 | |||
| Neutral | M = 0 | 0.22 | 0.0025 ± 2.5 × 10−5 | 0.24 | 0.0021 ± 6.5 × 10−5 |
| M = 1 | 0.22 | 0.0024 ± 2.6 × 10−5 | 0.22 | 0.0020 ± 6.2 × 10−5 | |
| M = 5 | 0.24 | 0.0020 ± 2.2 × 10−5 | 0.17 | 0.0012 ± 3.7 × 10−5 | |
| 3 QTLs with 0.05 starting freq. | M = 0 | 0.19 | 0.0037 ± 5.3 × 10−5 | 0.24 | 0.0027 ± 0.0001 |
| M = 1 | 0.20 | 0.0034 ± 4.8 × 10−5 | 0.22 | 0.0023 ± 8.6 × 10−5 | |
| M = 5 | 0.22 | 0.0029 ± 4.6 × 10−5 | 0.16 | 0.0015 ± 6.6 × 10−5 | |
| 3 QTLs with 0.5 starting freq. | M = 0 | 0.21 | 0.0025 ± 2.8 × 10−5 | 0.24 | 0.0023 ± 6.6 × 10−5 |
| M = 1 | 0.22 | 0.0024 ± 2.5 × 10−5 | 0.22 | 0.0021 ± 7.2 × 10−5 | |
| M = 5 | 0.24 | 0.0020 ± 2.2 × 10−5 | 0.16 | 0.0013 ± 4.3 × 10−5 | |
| 10 QTLs with 0.05 starting freq. | M = 0 | 0.16 | 0.0048 ± 5.2 × 10−5 | 0.26 | 0.0033 ± 0.0002 |
| M = 1 | 0.17 | 0.0046 ± 6.1 × 10−5 | 0.24 | 0.0030 ± 0.0002 | |
| M = 5 | 0.19 | 0.0039 ± 6.0 × 10−5 | 0.17 | 0.0018 ± 0.0001 | |
| 10 QTLs with 0.5 starting freq. | M = 0 | 0.21 | 0.0026 ± 3.1 × 10−5 | 0.24 | 0.0025 ± 9.6 × 10−5 |
| M = 1 | 0.21 | 0.0025 ± 2.7 × 10−5 | 0.22 | 0.0022 ± 9.3 × 10−5 | |
| M = 5 | 0.23 | 0.0021 ± 2.2 × 10−5 | 0.17 | 0.0014 ± 5.6 × 10−5 | |
| 20 QTLs with 0.05 starting freq. | M = 0 | 0.16 | 0.0050 ± 5.5 × 10−5 | 0.27 | 0.0044 ± 0.0002 |
| M = 1 | 0.17 | 0.0048 ± 5.4 × 10−5 | 0.24 | 0.0040 ± 0.0002 | |
| M = 5 | 0.19 | 0.0043 ± 6.2 × 10−5 | 0.18 | 0.0022 ± 0.0001 | |
| 20 QTLs with 0.5 starting freq. | M = 0 | 0.21 | 0.0027 ± 3.4 × 10−5 | 0.24 | 0.0026 ± 0.0001 |
| M = 1 | 0.21 | 0.0026 ± 2.7 × 10−5 | 0.22 | 0.0022 ± 7.9 × 10−5 | |
| M = 5 | 0.23 | 0.0021 ± 2.3 × 10−5 | 0.17 | 0.0015 ± 5.9 × 10−5 |
For the B populations, variance in heterozygosity and FST over 50 kb windows is shown. For each simulated scenarios, 95% confidence intervals for variance in heterozygosity and FST over 50 kb windows calculated from replicate simulation are shown.