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. 2016 Dec 5;113(51):E8228–E8237. doi: 10.1073/pnas.1615677113

Table S1.

Top 10 Reactome pathways enriched among the genes up-regulated >50% in Cbl, Cbl-b dKD MCF10A cells over control cells

Term Overlap P value Adjusted P value Z-score Combined score
Unfolded protein response (UPR) 15/79 1.83809E-11 9.20884E-09 −1.946148267 36.0097789
IRE1α activates chaperones 10/48 2.36377E-08 5.92124E-06 −1.930889588 23.24205058
XBP1(S) activates chaperone genes 9/46 1.97574E-07 3.29948E-05 −1.888849525 19.49133983
ATF6-α activates chaperones 5/12 5.53459E-06 0.000554566 −1.736535884 13.01937413
ATF6-α activates chaperone genes 5/10 2.75676E-06 0.000345284 −1.531439766 12.20732616
PERK regulates gene expression 4/28 0.001683934 0.1406085 −2.074476627 4.069658138
Class I MHC mediated antigen processing and presentation 10/255 0.010818693 0.494316978 −2.151411285 1.515837731
SHC1 events in ERBB4 signaling 3/28 0.013553964 0.510670007 −2.213166992 1.487318324
GRB2 events in ERBB2 signaling 3/30 0.016070847 0.510670007 −2.124871487 1.427980947
SHC1 events in ERBB2 signaling 3/32 0.018832923 0.510670007 −2.115029487 1.421366812

Microarray data were preprocessed using the GenePattern platform (50) and gene-set enrichment analysis was performed on the Enrichr platform (51).