Table 3.

Differential amounts of phasiRNAs in the PHAS regions in leaves versus roots.

Gene Name	Annotation	Number of phasiRNA	Leaf/Root (Germinated Seedlings)		Leaf/Root (Young Seedlings)		Leaf/Root (Seedlings)		Leaf/Root (Three Stages)
			C08	W05	C08	W05	C08	W05	C08	W05
Glyma.04G219600	Disease resistance protein (TIR-NB-LRR class)	4	2.2	5.4	2.6	1.6	5.3	3.9	2.9	3.0
Glyma.06G146200	Disease resistance protein (TIR-NB-LRR class)	4	0.8	1.8	1.2	1.0	2.9	1.2	1.4	1.3
Glyma.06G205100	Disease resistance protein (TIR-NB-LRR class)	2	0.04	0.13	0.01	0.01	0.02	0.02	0.03	0.04
Glyma.06G285500	Disease resistance protein (TIR-NB-LRR class)	1	7.1	27.9	6.1	6.8	10.6	13.1	7.3	12.0
Glyma.08G301200	Disease resistance protein (TIR-NB-LRR class)	1	0.1	0.3	0.6	0.4	1.5	1.1	0.5	0.5
Glyma.12G163000	Disease resistance protein (TIR-NB-LRR class)	2	19.9	34.2	7.0	6.9	12.6	15.6	11.1	11.2
Glyma.13G187900	NB-ARC domain-containing disease resistance protein	4	1.1	1.4	1.4	1.6	4.8	2.7	2.2	1.9
Glyma.11G212800	LRR and NB-ARC domains-containing disease resistance protein	1	1.2	1.3	0.7	0.4	1.7	1.0	1.2	0.8
Glyma.07G048000	NTL9 NAC transcription factor-like 9	4	1.3	1.2	0.4	0.3	1.0	0.6	0.8	0.6
Glyma.16G016600	NTL9 NAC transcription factor-like 9	1	1.0	3.2	1.2	0.6	2.5	0.7	1.5	1.2
Glyma.09G025300	ATDCL2, DCL2	2	0.4	1.4	0.6	0.5	1.4	0.6	0.7	0.7
Glyma.16G050500	AFB3 auxin signaling F-box 3	1	0.1	0.3	0.3	0.4	0.7	0.5	0.5	0.4
Glyma.16G161900	Pentatricopeptide repeat (PPR) superfamily protein	1	3.4	7.5	2.7	2.3	6.8	3.1	3.9	3.9
Glyma.16G058900	NA	3	0.8	1.6	1.1	0.9	2.3	1.4	1.1	1.3
Glyma.16G147100	NA	3	0.4	0.9	1.0	0.5	1.6	0.8	0.8	0.7
Chr15_44546856_44547257	NA	4	1.3	3.8	3.0	2.2	5.8	2.6	2.4	2.9
Glyma.09G032400	NA	5	1.3	2.0	3.1	2.7	4.4	2.8	2.5	2.5

Red: Fold change ≤0.5 (higher abundance in the roots); Green: Fold change ≥2 (high abundance in the leaves).